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Report for Sequence Feature Glyma.19g039000

Feature Type:gene_model
Chromosome:Gm19
Start:5457432
stop:5460114
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g039000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G15840.1AT CO,FG JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
KOG1601 KOG GATA-4/5/6 transcription factors JGI N/AIEA
PTHR31319PantherFam ZINC FINGER PROTEIN CONSTANS-LIKE 4 JGI N/AIEA
PF00643Pfam B-box zinc finger JGI N/AIEA
PF06203Pfam CCT motif JGI N/AIEA

Proteins Associated with Glyma.19g039000
LocusGene SymbolProtein Name
COL2b Constance-like 2 gene b

Gene model name correspondences to Glyma.19g039000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g05170 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g039000
>Glyma.19g039000.1 sequence-type=CDS polypeptide=Glyma.19g039000.1.p locus=Glyma.19g039000 id=Glyma.19g039000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGAAGGAAGGCACCAACAACGTTGGTGGCAGCAACACTGGCACCACCTGGTCACGTGTCTGTGACACGTGCCTGTCTGCGCCATGCGTGCTGTACTGCCATGCAGACTCAGCATATCTTTGCTCTTCCTGTGATGCTCGTGTGCATGCAGCTAACCGTGTGGCCTCGAGACACAAGCGTGTGTGGGTGTGCGAAGCGTGTGAGCGTGCTCCGGCGGCGTTTCTATGCAAAGCTGACGCAGCTTCTCTTTGTTCTTCCTGTGATGCTGACATTCACTCAGCAAACCCTCTCGCTAGCCGCCACAACCGTGTTCCCATTCTCCCGATCTCAGGTTCCCTCTTCAGGGAACCAGAGCACAATCACAAACGCGTGGAACACGCGTTCGTGAATGAGGTTGAGGAGGAAGAGGAAGGGGTTTTTGATGAGTATGAAGACGAGGTTGAAGCTGCTTCGTGGTTGTTGCCACATCCTATGAAAAATAATGATGAAATTGAGGAGAATGATTGTGGTGACGAGGGTTTTTTGTTTGTTGATGAGTATTTGGACAATCTTGTTGATTGTTGTAACTCATGTGGTCACAATGACAACCAGTTTAGCAACGTTTATCAGCACCAGCAGAATTACAACACTGTCCCTCAGAACTATGTAGTGGTTCCAGTTCAGGTGCCGCAGCATTTTCAACCCGGTTTGGACTTTGACTCATCAAAAGCTGGGTTCAGTTACGATGGTTCTCTTAGTCAAAGTGTTTCGGTTTCATCAATGGATGTTGGAGTTGTACCCGAATCAACAGTAAGTGGCATCTCAATGTCCCACTCAAAGTCACCAATAGGGACAAATGACCTATTTCCTCCCCTTCTCATGCCTTCACATCTCACACCAATGGACAGAGAGGCAAGAGTCCTAAGATATAGGGAGAAAAAGAAGACAAGAAAGTTCGAGAAGAAAATAAGATATGCCTCAAGGAAGGCCTATGCAGAGACTAGACCCCGCATAAAGGGTCGTTTTGCAAAGAGAACTGATGTAGAAGCTGAAGTGGATCAGATGTTCTCCACAAAACTATTCAATGAAGTTGGAGGTAGCATTTTTCCCACTTTCTAG
Predicted protein sequences of Glyma.19g039000
>Glyma.19g039000.1.p sequence-type=predicted peptide transcript=Glyma.19g039000.1 locus=Glyma.19g039000 id=Glyma.19g039000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLKEGTNNVGGSNTGTTWSRVCDTCLSAPCVLYCHADSAYLCSSCDARVHAANRVASRHKRVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHNRVPILPISGSLFREPEHNHKRVEHAFVNEVEEEEEGVFDEYEDEVEAASWLLPHPMKNNDEIEENDCGDEGFLFVDEYLDNLVDCCNSCGHNDNQFSNVYQHQQNYNTVPQNYVVVPVQVPQHFQPGLDFDSSKAGFSYDGSLSQSVSVSSMDVGVVPESTVSGISMSHSKSPIGTNDLFPPLLMPSHLTPMDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTKLFNEVGGSIFPTF*






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