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Report for Sequence Feature Glyma.12g161300

Feature Type:gene_model
Chromosome:Gm12
Start:30472581
stop:30480422
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g161300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G14940.1AT ATPPC3,PPC3 JGI N/AIEA
4.1.1.31EC phosphoenolpyruvate carboxylase JGI N/AIEA
GO:0006099GO-bp tricarboxylic acid cycle JGI N/AIEA
GO:0015977GO-bp carbon fixation JGI N/AIEA
GO:0008964GO-mf phosphoenolpyruvate carboxylase activity JGI N/AIEA
K01595KEGG Methane metabolism JGI N/AIEA
PTHR30523PantherFam PHOSPHOENOLPYRUVATE CARBOXYLASE JGI N/AIEA
PF00311Pfam Phosphoenolpyruvate carboxylase JGI N/AIEA

Proteins Associated with Glyma.12g161300
LocusGene SymbolProtein Name
PEPC1 phosphoenolpyruvate carboxylase
PEPC16 phosphoenolpyruvate carboxylase
PEPC6 Phosphoenolpyruvate carboxylase6 gene
PPC16 phosphoenolpyruvate carboxylase
PEPC6 Phosphoenolpyruvate carboxylase gene 6
ppc16 Phosphoenolpyruvate carboxylase isoform

Gene model name correspondences to Glyma.12g161300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g09810 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g161300
>Glyma.12g161300.1 sequence-type=CDS polypeptide=Glyma.12g161300.1.p locus=Glyma.12g161300 id=Glyma.12g161300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAACAGGAACTTGGAAAAGATGGCATCGATTGATGCTCAGCTTCGGCTGTTGGTTCCGGCCAAAGTGAGTGAGGATGACAAACTGGTTGAGTATGATGCTTTGCTTTTGGATCGGTTCCTTGATATTCTTCAGGATTTACATGGGGAGGATCTGAAAGAAACGGTTCAAGAGGTGTATGAGCTTTCTGCTGAGTATGAAGGTAAGCATGACCCAAAGAAACTAGAGGAACTTGGAAATCTGATAACTAGTTTGGATGCTGGAGATTCCATTGTGGTTGCCAAGTCCTTTTCCCACATGCTTAACTTGGCCAACTTAGCCGAAGAGGTCCAAATTGCCCACAGTCGAAGGAACAAGTTGAAGAAAGGTGATTTTGCTGATGAAAACAATGCCACCACTGAATCAGACATTGAAGAAACTCTAAAGAAACTTGTGGTGGATATGAAGAAGTCTCCTCAGGAAGTTTTTGATGCACTTAAAAACCAGACTGTTGATCTGGTTCTTACTGCTCATCCTACTCAATCTGTCCGTAGGTCTTTGCTTCAAAAACATGGAAGGATAAGAAATAATTTAACTCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAACTTGACGAGGCTCTACAGAGGGAGATCCAAGCTGCATTCCGTACTGATGAAATCAGGAGGACCCCTCCAACCCCACAAGATGAGATGAGAGCAGGGATGAGCTACTTCCATGAAACAATTTGGAAGGGTGTACCCACATTTCTACGTCGTGTTGATACAGCTTTGAAGAATATAGGGATCAACGAACGTGTCCCTTATAATGCTCCTCTCATTCAATTTTCTTCTTGGATGGGTGGAGATCGTGATGGCAATCCAAGAGTAACTCCTGAAGTGACCAGAGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAACTTGTACTACTCCCAGATAGAGGATCTTATGTTTGAGCTGTCAATGTGGCGCTGCAATGACGAGCTACGTGTCCGTGCAGATGAACTTAACAGGTCTTCCAAGAAAAATTCAGTCGCAAAACACTACATAGAATTTTGGAAAGCCATTCCTCCAAATGAACCATATCGTGTGCTACTGGGTGAAGTAAGGAATAGGCTTTACCAGACTCGTGAACGCTCACGCCATTTGCTAGCTCACGGATACTCTGACATTCCAGAGGAAGAGACTTTTACCAATGTTGAGGAGTTCTTGGAACCCCTTGAACTCTGTTACAGATCACTCTGTGCTTGTGGCGATCGTGCAATTGCCGATGGAAGCCTTCTAGATTTCTTGAGACAAGTCTCTACTTTCGGACTCTCCCTAGTGAGGCTTGACATAAGGCAAGAGTCAGACCGCCACACAGACGTCTTAGACGCCATCACCAAACATTTAGAAATAGGCTCATACCAGGAATGGTCGGAGGAAAAACGGCAGCAATGGCTTTTATCTGAGTTGAGTGGCAAACGGCCCCTATTCGGCCCTGATCTTCCCCAAACCGAAGAAATCAGAGACGTGTTGGAGACATTCCATGTCATAGCAGAGCTTCCACTAGACAACTTTGGAGCATACATCATCTCAATGGCAACTGCACCTTCTGATGTGCTTGCAGTTGAGCTTCTGCAGCGCGAATGCCATGTCAAGCATCCACTAAGAGTTGTGCCATTGTTTGAGAAGCTAGCTGATCTAGAAGCAGCACCGGCCGCGTTGGCGCGATTGTTCTCTGTAGACTGGTACAGAAACAGGATCAATGGGAAGCAGGAAGTGATGATAGGCTATTCTGATTCTGGCAAAGATGCTGGAAGGTTTTCAGCTGCATGGCAGCTGTATAAGGCTCAGGAGGAGCTTATAATGGTGGCTAAGCAGTATGGTGTGAAGCTGACAATGTTCCATGGTCGTGGAGGGACAGTTGGAAGAGGAGGTGGTCCAACTCACCTTGCTATTCTGTCTCAGCCTCCTGAAACCATTCATGGATCGCTGCGCGTGACTGTCCAAGGTGAAGTTATTGAGCAATCGTTTGGAGAGCAGCACTTGTGCTTCAGAACGCTTCAAAGGTTCACTGCAGCTACTCTAGAACATGGAATGCACCCTCCAATTTCTCCTAAACCGGAATGGAGGGCTTTGATGGATGAGATGGCTGTCATTGCCACTGAGGAGTACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCAAAGAGGAGGCCAAGTGGAGGTATTGAGACACTCCGTGCCATACCTTGGATCTTTGCCTGGACACAAACAAGGTTCCATCTTCCAGTGTGGCTAGGCTTTGGTGCAGCATTCAAACATGTTATTGAGAAGGATGTTAGGAATATTCATGTGCTGCAGGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACTATTGATTTAGTGGAAATGGTGTTTGCCAAAGGAGACCCAGGGATAGCTGCTCTTTATGATAGGCTCCTTGTTTCAGAGGATCTGTGGTCATTTGGGGAGCAGTTGAGGACCATGTACGAAGAAACCAAGGAACTCCTCCTTCAGGTGGCTGGCCATAGGGATCTTCTTGAAGGAGATCCATACTTGAAGCAAAGACTGCGCTTGCGTGATTCTTATATTACTACCCTAAACGTGTGCCAAGCCTACACGTTGAAACGTATCCGTGATCCAAACTATAATGTGAAGCTGCGCCCTCACATCTCCAAAGAGTCTATAGAGATAAGTAAACCTGCTGATGAACTTATAACACTTAACCCAACAAGTGAATATGCACCTGGTTTGGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCTTGCAAAACACTGGCTAA
Predicted protein sequences of Glyma.12g161300
>Glyma.12g161300.1.p sequence-type=predicted peptide transcript=Glyma.12g161300.1 locus=Glyma.12g161300 id=Glyma.12g161300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MANRNLEKMASIDAQLRLLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPKKLEELGNLITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHSRRNKLKKGDFADENNATTESDIEETLKKLVVDMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNNLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPTFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELNRSSKKNSVAKHYIEFWKAIPPNEPYRVLLGEVRNRLYQTRERSRHLLAHGYSDIPEEETFTNVEEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEEKRQQWLLSELSGKRPLFGPDLPQTEEIRDVLETFHVIAELPLDNFGAYIISMATAPSDVLAVELLQRECHVKHPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIMVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDVRNIHVLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDRLLVSEDLWSFGEQLRTMYEETKELLLQVAGHRDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEISKPADELITLNPTSEYAPGLEDTLILTMKGIAAGLQNTG*






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