Report for Sequence Feature Glyma.10g197000
Feature Type: | gene_model |
Chromosome: | Gm10 |
Start: | 42912993 |
stop: | 42929569 |
Source: | JGI |
Version: | Wm82.a4.v1 |
High confidence: | yes |
|
|
Annotations for Glyma.10g197000
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
AT5G04360.1 | AT |
ATLDA,ATPU1,LDA,PU1 |
JGI | N/A | IEA |
3.2.1.142 | EC |
limit dextrinase |
JGI | N/A | IEA |
GO:0005975 | GO-bp |
carbohydrate metabolic process |
JGI | N/A | IEA |
GO:0003824 | GO-mf |
catalytic activity |
JGI | N/A | IEA |
GO:0004553 | GO-mf |
hydrolase activity, hydrolyzing O-glycosyl compounds |
JGI | N/A | IEA |
KOG0470 |
KOG |
1,4-alpha-glucan branching enzyme/starch branching enzyme II |
JGI | N/A | IEA |
PTHR10357 | PantherFam |
ALPHA-AMYLASE FAMILY MEMBER |
JGI | N/A | IEA |
PF02922 | Pfam |
Carbohydrate-binding module 48 (Isoamylase N-terminal domain) |
JGI | N/A | IEA |
PF11852 | Pfam |
Domain of unknown function (DUF3372) |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.10g197000 Gene Call Version Wm82.a4.v1
Corresponding Name | Annotation Version | Evidence | Comments |
Glyma10g34080 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.10g197000
>Glyma.10g197000.1 sequence-type=CDS polypeptide=Glyma.10g197000.1.p locus=Glyma.10g197000 id=Glyma.10g197000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATCTGTTAGCATCATCCTCTTCTCTTTCTCCTTCTCTCCCTTCTTCATTCCCTCGCCCTTCTCTCCATCTCCACCTTCACTTTCCTTCCCAAACTACCCAGCTTCGCCTCCATACCCCACCACCCCTTTCTTGCTCCCTTAATTCTTCTTCTTCTTCTTCTTACGTGGAACAATCTGCTTCATCTTCTCAGATGCAGAATGGCTTGCTGTACTCCAGAGCTTATTGGGTTGCTGAATCTCTCATAGCTTGGGACGTGGATGTTGGAAACGGGTTTTCTTGCTACCTGCTTGCCAGCAAAAATGCTTCTTTGACCATTGCAAATTGCCAAATTCAAGGCGAGGATTTGAAAATTAAGCTTCAGGAGGATAGGGTTGGCCTTCCTGCAAATGTGGTGGAGAAATTTCCCCATATTCGAGGTCACAAAGTTTTCAGCCTGCCACCTACTTTGGATGTTAAGCCTCTTCTTAAATTCCGGTTAGCAGTTGTTATTTGTGATTCTGATGGGGAATGCATGAACTGTACTGGTTTGCAATTACCTGGTGTTTTAGATGACCTTTTCTCATATAGTGGTCCCCTTGGTGCACTTTTCTCAGAGGAAGCTGTGTCACTTTACCTGTGGGCACCTACTGCTCAAGCAGTGCATGCTTACATCTATAAGGACCCATCAGGAGATGATCCCATAGAAATTGTTTGCCTTGAGGAGGAAAATGGTGTTTGGAGAACTAAAGGACCAAAAAGTTGGGAAGGTTGTTACTATGTTTATGAAGTATGTGTTTACCACCCTAGCACTATGCGGATTGAAAAATGCTATACAAGTGATCCATATGCAAGAGGACTTTCATCAGATGGCAGGCGGAGTTTTCTGCTTAATCTTGACTCTGTTAAGTTAAAACCTGATGGATGGGATAATCTGGCAAATAAAAAACCTACTATACATTCTTTCTCTGATATAAGCATATATGAAATGCATATAAGGGATTTCAGTGCCAGTGACCTCTCTGTGCAACCTGAATTTCGTGGTGGTTATCTGGCCTTTACATTGCAGGATTCTGCGGGTGTACTTCATCTGAAGAAATTATCAAGTGCTGGTATCACTCATGTCCATCTATTGCCAACATTTCAGTTTGCTGGGGTTGATGATCAAAAGGAGGACTGGAGATTTGTAGATACCTCAATACTGGAAAGTTTGCCACCTGATTCAGATCAGCAACAAGCTCTCATCACAGCCATCCAAAACTTTGATGGTTACAACTGGGGGTACAACCCTGTTCTTTGGGGCGTTCCTAAAGGCAGCTATGCAAGTAATCCAAACGGTCCATACCGTACAATTGAGTTCCGAAAGATGGTTATGGCTCTTAACCATATCGGCCTCCGTGTTGTCTTGGATGTTGTCTACAATCATTTGCAAGGAAGTGGGCCTTTTGATGAACATTCTGTCCTTGATAAGATTGTTCCAGGTTACTATTTAAGAAGGAATAGTGATGGTTTAATCGAGCACAGTACTTGTATAAATAATACTGCTAGTGAGCACTTTATGGTTGAGCGTTTGATCCTTGATGATCTTGTACACTGGGCTGTCAATTACAAGATTGATGGGTTCAGATTTGATCTTATGGGCCATATAATGAAGAGCACAATGGTGAAAGCAAAAACTGCTCTCCAATGTTTAACAAAAGAAAAGGATGGACTTGATGGTTCAAGCATCTACATATATGGTGAAGGATGGGACTTTGGTGAAGTTGCCAAAAATGGCCGTGGGGTAAATGCTTCTCAGTTCAATCTCCCAGGAACACAAATTGGGAGCTTTAATGACCGAATTCGAGATGCCATACTTGGTGGATCTCCGTTTGGCCACCCTCTACAACAGGGTTTTGTGACTGGGCTACTCTTGCAGCCTAATGGCCATGACCATGGAACAGAAGCTAATGCGAAATCCATGCTTGCTGCATCAATGGATCACATCCAGATTGGAATGGCTGCAAACTTGAAGGATTTTGTGCTAACCAATTCTGAAGGGGAAGAGGTAAAAGGGTCAGAAATATTAACATATGGTGGGACACCTGTTGCATATGCCTCATGCCCCATAGAGACAATCAATTATGTTTCTGCTCATGACAATGAAACCCTATTTGACATTGTGAGCTTAAAGACTCCAATGGATATCAGTGTATCTGAGAGATGCAGGATAAACCATTTGGCAACCAGTATTATAGCATTATCACAGGGTATACCATTTTTTCATTCTGGAGATGAGATACTCCGCTCAAAATCACTGGATCGAGATTCTTACAATTCTGGTGATTGGTTCAACAGACTTGACTTCACATACAATAGTAATAATTGGGGTGTAGGACTTCCTCCACAAGAGAAAAATGAAAAGAACTGGCCACTAATCAAACCAAGACTGGCAAACCCATCCTTCAGGCCTCAGAAGACTGACATCCTTGCTACGGTGGACAATTTCTTGAACCTGCTGCGTATAAGATACTCTTCACCACTTTTCCGCTTGAAGACAGCTAACACTATCCAGGAACGAGTACGCTTTCACAACACTGGACCATCATGGGTTTGTGGAGTCATAGTGATGAGCATTGAAGATGGTCACAATGGCTTTCCTGGGTTGTCTCAGTTGGATCCCATATATTCGTTCATTGTGGTTGTTTTCAATGCGAGTCCAAAAGAAGTATCATTTGTTAGCCCTGCCCTGCAATTGAGAAATCTCCAGTTGCATCCCATACAGGTATCATCATCTGACGACCTTGTTAAGAGCTCAAGATATGAGGCATCTTCTGGCTGTTTTGTTGTGCCTCGAAGGACAACAGCTGTGTTTGTGGAGCCAAGGAAAACGTGA
Predicted protein sequences of Glyma.10g197000
>Glyma.10g197000.1.p sequence-type=predicted peptide transcript=Glyma.10g197000.1 locus=Glyma.10g197000 id=Glyma.10g197000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHLLASSSSLSPSLPSSFPRPSLHLHLHFPSQTTQLRLHTPPPLSCSLNSSSSSSYVEQSASSSQMQNGLLYSRAYWVAESLIAWDVDVGNGFSCYLLASKNASLTIANCQIQGEDLKIKLQEDRVGLPANVVEKFPHIRGHKVFSLPPTLDVKPLLKFRLAVVICDSDGECMNCTGLQLPGVLDDLFSYSGPLGALFSEEAVSLYLWAPTAQAVHAYIYKDPSGDDPIEIVCLEEENGVWRTKGPKSWEGCYYVYEVCVYHPSTMRIEKCYTSDPYARGLSSDGRRSFLLNLDSVKLKPDGWDNLANKKPTIHSFSDISIYEMHIRDFSASDLSVQPEFRGGYLAFTLQDSAGVLHLKKLSSAGITHVHLLPTFQFAGVDDQKEDWRFVDTSILESLPPDSDQQQALITAIQNFDGYNWGYNPVLWGVPKGSYASNPNGPYRTIEFRKMVMALNHIGLRVVLDVVYNHLQGSGPFDEHSVLDKIVPGYYLRRNSDGLIEHSTCINNTASEHFMVERLILDDLVHWAVNYKIDGFRFDLMGHIMKSTMVKAKTALQCLTKEKDGLDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLPGTQIGSFNDRIRDAILGGSPFGHPLQQGFVTGLLLQPNGHDHGTEANAKSMLAASMDHIQIGMAANLKDFVLTNSEGEEVKGSEILTYGGTPVAYASCPIETINYVSAHDNETLFDIVSLKTPMDISVSERCRINHLATSIIALSQGIPFFHSGDEILRSKSLDRDSYNSGDWFNRLDFTYNSNNWGVGLPPQEKNEKNWPLIKPRLANPSFRPQKTDILATVDNFLNLLRIRYSSPLFRLKTANTIQERVRFHNTGPSWVCGVIVMSIEDGHNGFPGLSQLDPIYSFIVVVFNASPKEVSFVSPALQLRNLQLHPIQVSSSDDLVKSSRYEASSGCFVVPRRTTAVFVEPRKT*