SoyBase Follow us on Twitter @SoyBaseDatabase
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g098900

Feature Type:gene_model
Chromosome:Gm04
Start:8974257
stop:8995329
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g098900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G09020.1AT ATISA3,ISA3 JGI N/AIEA
3.2.1.68EC isoamylase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
GO:0043169GO-mf cation binding JGI N/AIEA
K01214KEGG Starch and sucrose metabolism JGI N/AIEA
PTHR10357PantherFam ALPHA-AMYLASE FAMILY MEMBER JGI N/AIEA
PF00128Pfam Alpha amylase, catalytic domain JGI N/AIEA
PF02922Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JGI N/AIEA

Gene model name correspondences to Glyma.04g098900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g10693 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g098900
>Glyma.04g098900.1 sequence-type=CDS polypeptide=Glyma.04g098900.1.p locus=Glyma.04g098900 id=Glyma.04g098900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCCATCACCCATTCCTTTACGCTTCCAAAATCGCCACTCAGTCCACACTCTTCCCTCCGGTTTCTTCCGCCGGAAACAGCGCCGGCCGTTCTTCGTTAGCCGGAAATTCGTCCGCCCGTGACGTGAGGTCGTTGAGGTTTATGAAGCAAGCATCGGGAAGCAAATCGAACAATGAACTTGGAGTTTTTAGCGAGACAATGGACCGCGCCAGGCATAGGACAACCACTGTTTATGGTGGTCGTGCTCAAGAAGGGGTTCTTGAGGAAGAAACCTCCAAGGTGATAGAGAGCAGACCATCATGGAAAGTTTTTCCAGGCCAGGCATTTCCATTGGGAGTATCAGAAGTTGACAATTGCATGAATTTTGCTATTTTTTCACAACATGCAACAGCTGTCACACTTTGTTTAGTACTTCCTGAGAGGGGAAGTATTGACGCATTGGATGGTGGCATGATAGAAATGGTTTTGGATCCTGATTTGAACAAAACTGGGGACATTTGGCACATATGTATTGAGGATCTTCCACGTAGCAATGTTCTGTATGGATATCGCATAGATGGACCTGGAGACCGGGGTAAGGGGCATCGATTTGACAGCAGCATTGTGCTTGTTGATCCTTATGCAAAACTAGTCGAAGGTCGAAGATATTTTGGGGATATTAGCTTGAAGTTGTCTAAGTTTCTCGGCACATATGATTTTGACAGCTTGCCTTTCGACTGGGGAGAAAATTACAAGCTTCCAAATATTTCTGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAAGTGATGAATCTAGTGGTTTGGATAGCAACATTCGTGGCAGCTACCTCGGTGTGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTAGAGTTGCTGCCTGTCTTTGAGTTTGACGAGTTGGAATTCCAGAGGTTTCCAAATCCCAGAGATCACATGATTAATACATGGGGTTATTCAACAATAAATTTTTTTGCTCCTATGAGTCGTTATGCTAGTGCTGGTGGAGGATCAGTTAATGCTTCCCGAGAGTTCAAGCAAATGGTTAAAGCGTTACATTCTGCTGGTATAGAGGTTATTTTGGATGTTGTCTACAATCATACTAATGAGGCTGATGATGCCTTTCCTTACACTACTTCATTTCGTGGCATAGATAATAAGGTTTATTACATGATGGACAATAATGGGCAATTGTTGAACTTCTCTGGCTGTGGAAATACATTGAATTGTAACCATCCTGTGGTCATGGAACTAATTCTTGACAGCCTAAGACACTGGGTCACCGAATATCATGTGGATGGATTTCGATTTGATCTTGCAAGTGTCCTTTGTCGAGGAATTGATGGCTCCCCCATTAATGCCCCCCCGCTTATTAGGGCAATTGCTAAAGATGCAGTATTATCAAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTCTATCTTGTTGGGAGTTTTCCAAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATGTACGGAAATTTATTAAGGGTGATTCTGGTGTGAAGGGGAGCTTTGCAACTCGTGTTGCTGGGTCTTCTGATCTTTACAGAGTGAACAACCGTAGGCCATATCATAGTATTAACTTTGTTATTGCACATGACGGATTTACCTTGCGTGATCTTGTTTCATACAATTTCAAGCACAATAAAGCCAATGGGGAAGGTGGAAAAGACGGAAGCAATGATAATTTCAGTTGGAATTGTGGTTTCGAAGGGGAAACTGATGATGCTAGTATAAGAGCTTTGCGATCACGGCAAATGAAAAACTTCCATTTGGCATTAATGATATCTCAGGGTACACCAATGATGCTAATGGGGGATGAATATGGCCATACTCGCTATGGAAATAACAATAGTTATGGGCATGATACTGCCATTAATAATTTTTTGTGGGATCAGTTGGATGCACGGAAGAGCGATCACTTCAGGTTTTTCTCAAAGGTGATAAAGTACCGGCATGCACATGAAGTATTCAGTCGTGAAAATTTTCTCAACACGAACGACATAACATGGCATGAGGACAATTGGGAGAATCCTGACAGCAAATTTCTTGCATTCACGCTTCATGACAGGAGCGGGGGAGATATCTATGTGGCATTTAATTCTCACGATTACTTTGTCAAAGTTCTGCTGCCCACACCTCCAAAAAAGAGAAACTGGTTCCGTGTGGCGGACACTAATCTCAAATCACCGGATGACTTTGTCCTTGATGGTGTCCCTAGCGTAGGAAACACGTACAATATAGCTCCATACTCCTCCATTCTTCTTGAGGCGAAGTTTTGA

>Glyma.04g098900.2 sequence-type=CDS polypeptide=Glyma.04g098900.2.p locus=Glyma.04g098900 id=Glyma.04g098900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACCGCGCCAGGCATAGGACAACCACTGTTTATGGTGGTCGTGCTCAAGAAGGGGTTCTTGAGGAAGAAACCTCCAAGGTGATAGAGAGCAGACCATCATGGAAAGTTTTTCCAGGCCAGGCATTTCCATTGGGAGTATCAGAAGTTGACAATTGCATGAATTTTGCTATTTTTTCACAACATGCAACAGCTGTCACACTTTGTTTAGTACTTCCTGAGAGGGGAAGTATTGACGCATTGGATGGTGGCATGATAGAAATGGTTTTGGATCCTGATTTGAACAAAACTGGGGACATTTGGCACATATGTATTGAGGATCTTCCACGTAGCAATGTTCTGTATGGATATCGCATAGATGGACCTGGAGACCGGGGTAAGGGGCATCGATTTGACAGCAGCATTGTGCTTGTTGATCCTTATGCAAAACTAGTCGAAGGTCGAAGATATTTTGGGGATATTAGCTTGAAGTTGTCTAAGTTTCTCGGCACATATGATTTTGACAGCTTGCCTTTCGACTGGGGAGAAAATTACAAGCTTCCAAATATTTCTGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAAGTGATGAATCTAGTGGTTTGGATAGCAACATTCGTGGCAGCTACCTCGGTGTGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTAGAGTTGCTGCCTGTCTTTGAGTTTGACGAGTTGGAATTCCAGAGGTTTCCAAATCCCAGAGATCACATGATTAATACATGGGGTTATTCAACAATAAATTTTTTTGCTCCTATGAGTCGTTATGCTAGTGCTGGTGGAGGATCAGTTAATGCTTCCCGAGAGTTCAAGCAAATGGTTAAAGCGTTACATTCTGCTGGTATAGAGGTTATTTTGGATGTTGTCTACAATCATACTAATGAGGCTGATGATGCCTTTCCTTACACTACTTCATTTCGTGGCATAGATAATAAGGTTTATTACATGATGGACAATAATGGGCAATTGTTGAACTTCTCTGGCTGTGGAAATACATTGAATTGTAACCATCCTGTGGTCATGGAACTAATTCTTGACAGCCTAAGACACTGGGTCACCGAATATCATGTGGATGGATTTCGATTTGATCTTGCAAGTGTCCTTTGTCGAGGAATTGATGGCTCCCCCATTAATGCCCCCCCGCTTATTAGGGCAATTGCTAAAGATGCAGTATTATCAAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTCTATCTTGTTGGGAGTTTTCCAAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATGTACGGAAATTTATTAAGGGTGATTCTGGTGTGAAGGGGAGCTTTGCAACTCGTGTTGCTGGGTCTTCTGATCTTTACAGAGTGAACAACCGTAGGCCATATCATAGTATTAACTTTGTTATTGCACATGACGGATTTACCTTGCGTGATCTTGTTTCATACAATTTCAAGCACAATAAAGCCAATGGGGAAGGTGGAAAAGACGGAAGCAATGATAATTTCAGTTGGAATTGTGGTTTCGAAGGGGAAACTGATGATGCTAGTATAAGAGCTTTGCGATCACGGCAAATGAAAAACTTCCATTTGGCATTAATGATATCTCAGGGTACACCAATGATGCTAATGGGGGATGAATATGGCCATACTCGCTATGGAAATAACAATAGTTATGGGCATGATACTGCCATTAATAATTTTTTGTGGGATCAGTTGGATGCACGGAAGAGCGATCACTTCAGGTTTTTCTCAAAGGTGATAAAGTACCGGCATGCACATGAAGTATTCAGTCGTGAAAATTTTCTCAACACGAACGACATAACATGGCATGAGGACAATTGGGAGAATCCTGACAGCAAATTTCTTGCATTCACGCTTCATGACAGGAGCGGGGGAGATATCTATGTGGCATTTAATTCTCACGATTACTTTGTCAAAGTTCTGCTGCCCACACCTCCAAAAAAGAGAAACTGGTTCCGTGTGGCGGACACTAATCTCAAATCACCGGATGACTTTGTCCTTGATGGTGTCCCTAGCGTAGGAAACACGTACAATATAGCTCCATACTCCTCCATTCTTCTTGAGGCGAAGTTTTGA

>Glyma.04g098900.3 sequence-type=CDS polypeptide=Glyma.04g098900.3.p locus=Glyma.04g098900 id=Glyma.04g098900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCCATCACCCATTCCTTTACGCTTCCAAAATCGCCACTCAGTCCACACTCTTCCCTCCGGTTTCTTCCGCCGGAAACAGCGCCGGCCGTTCTTCGTTAGCCGGAAATTCGTCCGCCCGTGACGTGAGGTCGTTGAGGTTTATGAAGCAAGCATCGGGAAGCAAATCGAACAATGAACTTGGAGTTTTTAGCGAGGAAGAAACCTCCAAGGTGATAGAGAGCAGACCATCATGGAAAGTTTTTCCAGGCCAGGCATTTCCATTGGGAGTATCAGAAGTTGACAATTGCATGAATTTTGCTATTTTTTCACAACATGCAACAGCTGTCACACTTTGTTTAGTACTTCCTGAGAGGGGAAGTATTGACGCATTGGATGGTGGCATGATAGAAATGGTTTTGGATCCTGATTTGAACAAAACTGGGGACATTTGGCACATATGTATTGAGGATCTTCCACGTAGCAATGTTCTGTATGGATATCGCATAGATGGACCTGGAGACCGGGGTAAGGGGCATCGATTTGACAGCAGCATTGTGCTTGTTGATCCTTATGCAAAACTAGTCGAAGGTCGAAGATATTTTGGGGATATTAGCTTGAAGTTGTCTAAGTTTCTCGGCACATATGATTTTGACAGCTTGCCTTTCGACTGGGGAGAAAATTACAAGCTTCCAAATATTTCTGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAAGTGATGAATCTAGTGGTTTGGATAGCAACATTCGTGGCAGCTACCTCGGTGTGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTAGAGTTGCTGCCTGTCTTTGAGTTTGACGAGTTGGAATTCCAGAGGTTTCCAAATCCCAGAGATCACATGATTAATACATGGGGTTATTCAACAATAAATTTTTTTGCTCCTATGAGTCGTTATGCTAGTGCTGGTGGAGGATCAGTTAATGCTTCCCGAGAGTTCAAGCAAATGGTTAAAGCGTTACATTCTGCTGGTATAGAGGTTATTTTGGATGTTGTCTACAATCATACTAATGAGGCTGATGATGCCTTTCCTTACACTACTTCATTTCGTGGCATAGATAATAAGGTTTATTACATGATGGACAATAATGGGCAATTGTTGAACTTCTCTGGCTGTGGAAATACATTGAATTGTAACCATCCTGTGGTCATGGAACTAATTCTTGACAGCCTAAGACACTGGGTCACCGAATATCATGTGGATGGATTTCGATTTGATCTTGCAAGTGTCCTTTGTCGAGGAATTGATGGCTCCCCCATTAATGCCCCCCCGCTTATTAGGGCAATTGCTAAAGATGCAGTATTATCAAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTCTATCTTGTTGGGAGTTTTCCAAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATGTACGGAAATTTATTAAGGGTGATTCTGGTGTGAAGGGGAGCTTTGCAACTCGTGTTGCTGGGTCTTCTGATCTTTACAGAGTGAACAACCGTAGGCCATATCATAGTATTAACTTTGTTATTGCACATGACGGATTTACCTTGCGTGATCTTGTTTCATACAATTTCAAGCACAATAAAGCCAATGGGGAAGGTGGAAAAGACGGAAGCAATGATAATTTCAGTTGGAATTGTGGTTTCGAAGGGGAAACTGATGATGCTAGTATAAGAGCTTTGCGATCACGGCAAATGAAAAACTTCCATTTGGCATTAATGATATCTCAGGGTACACCAATGATGCTAATGGGGGATGAATATGGCCATACTCGCTATGGAAATAACAATAGTTATGGGCATGATACTGCCATTAATAATTTTTTGTGGGATCAGTTGGATGCACGGAAGAGCGATCACTTCAGGTTTTTCTCAAAGGTGATAAAGTACCGGCATGCACATGAAGTATTCAGTCGTGAAAATTTTCTCAACACGAACGACATAACATGGCATGAGGACAATTGGGAGAATCCTGACAGCAAATTTCTTGCATTCACGCTTCATGACAGGAGCGGGGGAGATATCTATGTGGCATTTAATTCTCACGATTACTTTGTCAAAGTTCTGCTGCCCACACCTCCAAAAAAGAGAAACTGGTTCCGTGTGGCGGACACTAATCTCAAATCACCGGATGACTTTGTCCTTGATGGTGTCCCTAGCGTAGGAAACACGTACAATATAGCTCCATACTCCTCCATTCTTCTTGAGGCGAAGTTTTGA
Predicted protein sequences of Glyma.04g098900
>Glyma.04g098900.1.p sequence-type=predicted peptide transcript=Glyma.04g098900.1 locus=Glyma.04g098900 id=Glyma.04g098900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLHHPFLYASKIATQSTLFPPVSSAGNSAGRSSLAGNSSARDVRSLRFMKQASGSKSNNELGVFSETMDRARHRTTTVYGGRAQEGVLEEETSKVIESRPSWKVFPGQAFPLGVSEVDNCMNFAIFSQHATAVTLCLVLPERGSIDALDGGMIEMVLDPDLNKTGDIWHICIEDLPRSNVLYGYRIDGPGDRGKGHRFDSSIVLVDPYAKLVEGRRYFGDISLKLSKFLGTYDFDSLPFDWGENYKLPNISEKDLVIYEMNVRAFTSDESSGLDSNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDELEFQRFPNPRDHMINTWGYSTINFFAPMSRYASAGGGSVNASREFKQMVKALHSAGIEVILDVVYNHTNEADDAFPYTTSFRGIDNKVYYMMDNNGQLLNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPINAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVAGSSDLYRVNNRRPYHSINFVIAHDGFTLRDLVSYNFKHNKANGEGGKDGSNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFLWDQLDARKSDHFRFFSKVIKYRHAHEVFSRENFLNTNDITWHEDNWENPDSKFLAFTLHDRSGGDIYVAFNSHDYFVKVLLPTPPKKRNWFRVADTNLKSPDDFVLDGVPSVGNTYNIAPYSSILLEAKF*

>Glyma.04g098900.2.p sequence-type=predicted peptide transcript=Glyma.04g098900.2 locus=Glyma.04g098900 id=Glyma.04g098900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDRARHRTTTVYGGRAQEGVLEEETSKVIESRPSWKVFPGQAFPLGVSEVDNCMNFAIFSQHATAVTLCLVLPERGSIDALDGGMIEMVLDPDLNKTGDIWHICIEDLPRSNVLYGYRIDGPGDRGKGHRFDSSIVLVDPYAKLVEGRRYFGDISLKLSKFLGTYDFDSLPFDWGENYKLPNISEKDLVIYEMNVRAFTSDESSGLDSNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDELEFQRFPNPRDHMINTWGYSTINFFAPMSRYASAGGGSVNASREFKQMVKALHSAGIEVILDVVYNHTNEADDAFPYTTSFRGIDNKVYYMMDNNGQLLNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPINAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVAGSSDLYRVNNRRPYHSINFVIAHDGFTLRDLVSYNFKHNKANGEGGKDGSNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFLWDQLDARKSDHFRFFSKVIKYRHAHEVFSRENFLNTNDITWHEDNWENPDSKFLAFTLHDRSGGDIYVAFNSHDYFVKVLLPTPPKKRNWFRVADTNLKSPDDFVLDGVPSVGNTYNIAPYSSILLEAKF*

>Glyma.04g098900.3.p sequence-type=predicted peptide transcript=Glyma.04g098900.3 locus=Glyma.04g098900 id=Glyma.04g098900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLHHPFLYASKIATQSTLFPPVSSAGNSAGRSSLAGNSSARDVRSLRFMKQASGSKSNNELGVFSEEETSKVIESRPSWKVFPGQAFPLGVSEVDNCMNFAIFSQHATAVTLCLVLPERGSIDALDGGMIEMVLDPDLNKTGDIWHICIEDLPRSNVLYGYRIDGPGDRGKGHRFDSSIVLVDPYAKLVEGRRYFGDISLKLSKFLGTYDFDSLPFDWGENYKLPNISEKDLVIYEMNVRAFTSDESSGLDSNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDELEFQRFPNPRDHMINTWGYSTINFFAPMSRYASAGGGSVNASREFKQMVKALHSAGIEVILDVVYNHTNEADDAFPYTTSFRGIDNKVYYMMDNNGQLLNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPINAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVAGSSDLYRVNNRRPYHSINFVIAHDGFTLRDLVSYNFKHNKANGEGGKDGSNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFLWDQLDARKSDHFRFFSKVIKYRHAHEVFSRENFLNTNDITWHEDNWENPDSKFLAFTLHDRSGGDIYVAFNSHDYFVKVLLPTPPKKRNWFRVADTNLKSPDDFVLDGVPSVGNTYNIAPYSSILLEAKF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo