Glyma09g37810 - SoyBase

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Report for Sequence Feature Glyma09g37810

Feature Type:	gene_model
Chromosome:	Gm09
Start:	43315809
stop:	43320996
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g37810

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G44830	AT	Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein \| chr2:18490398-18492779 FORWARD LENGTH=765	SoyBase	E_val: 0	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0009855	GO-bp	Annotation by Michelle Graham. GO Biological Process: determination of bilateral symmetry	SoyBase	N/A	ISS
GO:0009887	GO-bp	Annotation by Michelle Graham. GO Biological Process: organ morphogenesis	SoyBase	N/A	ISS
GO:0010014	GO-bp	Annotation by Michelle Graham. GO Biological Process: meristem initiation	SoyBase	N/A	ISS
GO:0010051	GO-bp	Annotation by Michelle Graham. GO Biological Process: xylem and phloem pattern formation	SoyBase	N/A	ISS
GO:0010073	GO-bp	Annotation by Michelle Graham. GO Biological Process: meristem maintenance	SoyBase	N/A	ISS
GO:0010089	GO-bp	Annotation by Michelle Graham. GO Biological Process: xylem development	SoyBase	N/A	ISS
GO:0044036	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell wall macromolecule metabolic process	SoyBase	N/A	ISS
GO:0048439	GO-bp	Annotation by Michelle Graham. GO Biological Process: flower morphogenesis	SoyBase	N/A	ISS
GO:0048519	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of biological process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0004713	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
KOG0610	KOG	Putative serine/threonine protein kinase	JGI		ISS
PTHR24351	Panther	RIBOSOMAL PROTEIN S6 KINASE	JGI		ISS
PTHR24351:SF88	Panther		JGI		ISS
PF00069	PFAM	Protein kinase domain	JGI		ISS
UniRef100_B9RCZ5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO	SoyBase	E_val: 0	ISS
UniRef100_I1L627	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1L627_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma09g37810

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma09g37810

Paralog	Evidence	Comments
Glyma18g48670	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma09g37810 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g242900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g37810

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g37810

Limit To All Plant Sequences

>Glyma09g37810.1   sequence type=CDS   gene model=Glyma09g37810   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCCAATGCACACACGGATGCAATAAGGGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGCGTGGAATTCCAGGAAGGGAAGGGAATCAGTTTTTGAAAGCGCGGGATGGCCCTATGAAACGTCTGGCCTCCATCAGAGAAGTGGCCCAGTTATCAAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGCGCCTACAAGAATGTGGAAAGGAAAGGGCTCTTTACCGGAAGCTGTAGAACTTGTGCCTGATATTGAGAAATTGAAGGGTGGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCAGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTACTGAAGAGTGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCATGTTCCTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAAGCATGGTTGAAGAATCAAATGAGATGGGTAACTTATCTTCGCCATTTTTAGGAGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCCTCATTGCCTCCAAGTGGCAATGTCAGCCCTCATAGCAGTATTGACAGTACTAGTGTTGTCAGAACAATGAGCATTGCTAATAGTTGTGCAAGTACATATCGAAGTGATGCAGTCACTAGCGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAACAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAACACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGTTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGAGCACAGACAGAAAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAAACTGACAGATTCTGCTGTTTGGTGATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAAAGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCCGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGTGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCAGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCCCGGCTCTTTGCTCAGAAAAATAAGAAATCACGAACGCCTAAAGCAGAACCTGGCATGCCGTCCAGCACGCTTCCTGAGCTTGTTGCCGAACCAACAACAGCTCGGTCAATGTCTTTCGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTACTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCTGAATCTCCGGCCACGAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGACTTGGGGTGAAGAGGGGCGCGACCGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCTGAAGTTCCAAGACCAGTTGAATGTGATCTACCAGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACATCAACAATAGCAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATACTGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA

Predicted protein sequences of Glyma09g37810

Limit To All Plant Sequences

>Glyma09g37810.1   sequence type=predicted peptide   gene model=Glyma09g37810   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MERVAEPKVLPRSLPVLVEVSNAHTDAIREAGQRLNGQDVSSVRGIPGREGNQFLKARDGPMKRLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPAPTRMWKGKGSLPEAVELVPDIEKLKGGNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLLKSVSLKGPFLEDLSIHVPAKKPSLAVVSPAESMVEESNEMGNLSSPFLGARASQNTENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIANSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRTRDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRTPKAEPGMPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVECDLPAKFEPVDTVGVGNINNSNNSSKRMVGNNNTDMKSGGKYLDFEFF*

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