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Report for Sequence Feature Glyma06g22804

Feature Type:gene_model
Chromosome:Gm06
Start:19619063
stop:19620083
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G73960AT Annotation by Michelle Graham. TAIR10: TBP-associated factor 2 | chr1:27805173-27814433 REVERSE LENGTH=1390 SoyBaseE_val: 8.00E-29ISS
GO:0009630GO-bp Annotation by Michelle Graham. GO Biological Process: gravitropism SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0008237GO-mf Annotation by Michelle Graham. GO Molecular Function: metallopeptidase activity SoyBaseN/AISS
GO:0008270GO-mf Annotation by Michelle Graham. GO Molecular Function: zinc ion binding SoyBaseN/AISS
PTHR15137Panther TRANSCRIPTION INITIATION FACTOR TFIID JGI ISS
PTHR15137:SF1Panther TBP-ASSOCIATED FACTOR 2 JGI ISS
UniRef100_D7KRP1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Membrane alanyl aminopeptidase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KRP1_ARALL SoyBaseE_val: 3.00E-27ISS
UniRef100_I1MUG4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MUG4_SOYBN SoyBaseE_val: 4.00E-32ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g22804 not represented in the dataset

Glyma06g22804 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g206500 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma06g22804.1   sequence type=CDS   gene model=Glyma06g22804   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATCAACTTTGTGGCTCATGTCATTTTTATCCTCTTATTTTTTCAGTACAATGACAACAATGAGAACCCTTACTCAGATTTGGTGAGCTTGAGTTTGGGCAATAGTATTCTCTTATTGTCATCACTCCTCAAATGCATTGAATGGCTTCTACAATTTGATAGTCTCATGCCAAGCTACAATGGAATCTTGACTATTAGTTGTATCCGGACATTGACCCAGATTGCATTAAAAGCTTTCATGGTTCATTCCGCTTACATAAAGGAATTGTGCCAAGTTAGAATTGAAGCATGTATAGCACTCCTTGATCTTGAATTCCAATACAAGGGCATGGATTCAACTTTGCTTTTATTTATCAAATACATAGAAGATTTTGCATTCCTTAAGAGGTTGTAA

>Glyma06g22804.1   sequence type=predicted peptide   gene model=Glyma06g22804   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MINFVAHVIFILLFFQYNDNNENPYSDLVSLSLGNSILLLSSLLKCIEWLLQFDSLMPSYNGILTISCIRTLTQIALKAFMVHSAYIKELCQVRIEACIALLDLEFQYKGMDSTLLLFIKYIEDFAFLKRL*







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