Report for Sequence Feature Glyma02g46330
Feature Type: gene_model
Chromosome: Gm02
Start: 50317321
stop: 50320111
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g46330
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G55180 AT
Annotation by Michelle Graham. TAIR10: O-Glycosyl hydrolases family 17 protein | chr5:22388834-22390550 FORWARD LENGTH=460
SoyBase E_val: 0 ISS
GO:0005975 GO-bp
Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004553 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds
SoyBase N/A ISS
GO:0043169 GO-mf
Annotation by Michelle Graham. GO Molecular Function: cation binding
SoyBase N/A ISS
PTHR16631 Panther
GLUCAN 1,3-BETA-GLUCOSIDASE-RELATED
JGI ISS
PF00332 PFAM
Glycosyl hydrolases family 17
JGI ISS
PF07983 PFAM
X8 domain
JGI ISS
UniRef100_E7CQZ9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: GLU n=1 Tax=Gossypium hirsutum RepID=E7CQZ9_GOSHI
SoyBase E_val: 0 ISS
UniRef100_I1JJC7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JJC7_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma02g46330
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g46330
Paralog Evidence Comments
Glyma14g02350 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g46330 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g294000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g46330
Coding sequences of Glyma02g46330
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g46330.1 sequence type=CDS gene model=Glyma02g46330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTCTGCAAACTGAGCATGGCTCCTCTCGCATTTTCCTTCTTCTTCATCCTTATCACATTCTTTTCTTCATCATCTGAAGCGGGATCCGTTGGAATAAACTATGGAAGGGTTGCGAACGACCTACCTACACCAGCGAAAGTGGTGGAGCTTCTGAAGGCACAAGGTCTGAACCGTGTGAAGCTCTACGACACCGACGCCACCGTCTTAACCGCGTTTGCAAACTCGGGAATCAAGGTCGTAGTTGCCATGCCAAACGAGCTTCTTGCCAACGCCGCCGCGGACCAGTCCTTCACCGATGCGTGGGTCCAAGCCAACATCTCCACCTACTACCCCGCCACGCAAATCGAAGCCATAGCCGTCGGAAACGAAGTCTTCGTCGACCCCAACAACACAACAAAGTTCCTCGTACCCGCCATGAAGAACGTCCACGCTTCTCTAACAAAGTACAACCTCGACAAAAACATTAAAATCTCCTCACCCATCGCACTCTCCGCGCTCCAGAACTCGTTCCCCGCCTCATCCGGTTCCTTCAAAACCGAACTCGTCGAACCGGTTATCAAACCCATGCTCGACCTGCTCCGCCAAACCGGTTCCTACTTAATGGTGAATGCGTATCCGTTTTTCGCTTACGCTGCAAACTCTGATAAAATCTCTTTAGACTACGCGCTATTCAAGGAAAACCCCGGCGTGGTTGATTCCGGTAATGGTTTAAAATACACGAACTTATTCGACGCTCAAATCGACGCCGTTTTCGCTGCCATGTCAGCACTCAAATACGAAGACGTTAAGATCGCGGTTTCGGAAACGGGTTGGCCTTCTGCTGGGGACTCTAACGAGATTGGAGCCAGCCCCGACAATGCGGCGTCGTATAACGGAAACTTGGTTAAACGCGTGATGAGTGGGAGTGGGACCCCCTTGAAGCAAAATGAGTCACTCGATGTTTTCCTCTTCGCGCTTTTCAATGAGAACCAGAAAACGGGTCCCACGTCGGAGAGAAACTACGGGCTGTTCTACCCCACTGAGAAGAAGGTTTACGATATTCCGCTCACGGCGGAGGAAATCAAGGAGGCGCCGCCGTCAGGAGTAGGGAAGAGCCAGGTTCCGGTGAGTGGTGAGGTGTCAACGACGACGTCTAAGGGCCAGACGTGGTGCGTAGCTAGTGGCGGTTCTTCGGAGAAGAAGCTGCAGAACGCTCTTAACTACGCTTGCGGAGAGGGTGGGGCTGATTGCACTCCAATTCAACCAGGTGCCACGTGTTACAATCCTAACACCTTGGAGGCACATGCTTCCTACGCCTTCAACAGTTACTATCAGAAGAAGGCACGTGCATCCGGCACGTGCGATTTTGGTGGCACTGCTTATGTCGTCACTCAGCCCCCTAAGTATGGTAACTGCGAATTCCCCACAGGATAA
Predicted protein sequences of Glyma02g46330
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g46330.1 sequence type=predicted peptide gene model=Glyma02g46330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLCKLSMAPLAFSFFFILITFFSSSSEAGSVGINYGRVANDLPTPAKVVELLKAQGLNRVKLYDTDATVLTAFANSGIKVVVAMPNELLANAAADQSFTDAWVQANISTYYPATQIEAIAVGNEVFVDPNNTTKFLVPAMKNVHASLTKYNLDKNIKISSPIALSALQNSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYAANSDKISLDYALFKENPGVVDSGNGLKYTNLFDAQIDAVFAAMSALKYEDVKIAVSETGWPSAGDSNEIGASPDNAASYNGNLVKRVMSGSGTPLKQNESLDVFLFALFNENQKTGPTSERNYGLFYPTEKKVYDIPLTAEEIKEAPPSGVGKSQVPVSGEVSTTTSKGQTWCVASGGSSEKKLQNALNYACGEGGADCTPIQPGATCYNPNTLEAHASYAFNSYYQKKARASGTCDFGGTAYVVTQPPKYGNCEFPTG*