Report for Sequence Feature Glyma02g36753
Feature Type: gene_model
Chromosome: Gm02
Start: 42183020
stop: 42185282
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g36753
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G18430 AT
Annotation by Michelle Graham. TAIR10: Calcium-binding EF-hand family protein | chr3:6326180-6327476 FORWARD LENGTH=175
SoyBase E_val: 1.00E-47 ISS
GO:0006499 GO-bp
Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation
SoyBase N/A ISS
GO:0030048 GO-bp
Annotation by Michelle Graham. GO Biological Process: actin filament-based movement
SoyBase N/A ISS
GO:0051645 GO-bp
Annotation by Michelle Graham. GO Biological Process: Golgi localization
SoyBase N/A ISS
GO:0051646 GO-bp
Annotation by Michelle Graham. GO Biological Process: mitochondrion localization
SoyBase N/A ISS
GO:0060151 GO-bp
Annotation by Michelle Graham. GO Biological Process: peroxisome localization
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0005509 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calcium ion binding
SoyBase N/A ISS
PTHR23056 Panther
CALCINEURIN B
JGI ISS
PTHR23056:SF4 Panther
CALCINEURIN B SUBUNIT
JGI ISS
UniRef100_G7JFI8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Calcineurin subunit B n=1 Tax=Medicago truncatula RepID=G7JFI8_MEDTR
SoyBase E_val: 8.00E-55 ISS
UniRef100_I1MT04 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MT04_SOYBN
SoyBase E_val: 1.00E-66 ISS
Expression Patterns of Glyma02g36753
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g36753
Paralog Evidence Comments
Glyma17g07970 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g36753 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g206100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g36753
Coding sequences of Glyma02g36753
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g36753.1 sequence type=CDS gene model=Glyma02g36753 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGTGGTGGGAGAGAGAAAGAAGATAATATTATGGGATGCACCAAACAAATACTTTCTCTCCATTCCCGAATTCGCCGTCAACCCTCTCTCTCTCTACATATATATAAATTCTTTCACGATTCAATTCAATTCAATTGAGGTGTTAACATTAATAATATTGCAGAGCTTGTTGAGGATGCTGGATGGGTTGAACTTCAAGGAATTTGTTGCCTTCTTGTCCGCCTTCAGTCCCCTGCCACTCTCCACCACAAAATTGATCATTTTCAAGGTCTATGATTCCGATTGCAATGGAAAAGTAACCTTCCATGACATGCTGAGGGCTTTAAGGGATTTGAGTGGACCCTTCATGTCTGATCAACAGAGAGAGGAAGTTCTGACACAGGTCCTTGAGGAAGCTGGCTATGCAAAGGATTGTTCATTAGTCTTGTCTGACTTCATGAAGATTCTTGGCAATTCGGGTTTGAAGATGGAAGTAGAGGTTCCGGTGGATTAG
Predicted protein sequences of Glyma02g36753
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g36753.1 sequence type=predicted peptide gene model=Glyma02g36753 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEVVGERKKIILWDAPNKYFLSIPEFAVNPLSLYIYINSFTIQFNSIEVLTLIILQSLLRMLDGLNFKEFVAFLSAFSPLPLSTTKLIIFKVYDSDCNGKVTFHDMLRALRDLSGPFMSDQQREEVLTQVLEEAGYAKDCSLVLSDFMKILGNSGLKMEVEVPVD*