Report for Sequence Feature Glyma.19g194300
Feature Type: gene_model
Chromosome: Gm19
Start: 45183357
stop: 45185175
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.19g194300
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G03840.1 AT
PEBP (phosphatidylethanolamine-binding protein) family protein
JGI N/A IEA
GO:0009910 GO-bp
negative regulation of flower development
EnsemblGenomes N/A IEA
GO:1903506 GO-bp
regulation of nucleic acid-templated transcription
EnsemblGenomes N/A IEA
GO:0003712 GO-mf
transcription cofactor activity
EnsemblGenomes N/A IEA
KOG3346
KOG
Phosphatidylethanolamine binding protein
JGI N/A IEA
PTHR11362 Panther
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
JGI N/A IEA
PF01161 PFAM
Phosphatidylethanolamine-binding protein
JGI N/A IEA
Proteins Associated with Glyma.19g194300
Locus Gene Symbol Protein Name
TFL1b Terminal Flower 1 gene 2
DT1 protein TERMINAL FLOWER 1-like
Expression Patterns of Glyma.19g194300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.19g194300
Paralog Evidence Comments
Glyma.03g194700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.19g194300 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma19g37890 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.19g194300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.19g194300.1 sequence-type=CDS polypeptide=Glyma.19g194300.1.p locus=Glyma.19g194300 ID=Glyma.19g194300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAAATGCCTTTAGAGCCTCTAATAGTGGGGAGAGTCATAGGAGAAGTTCTTGATTCTTTCACCACAAGCACAAAAATGACTGTGAGTTACAACAAGAAGCAAGTTTACAATGGCCATGAGCTCTTCCCTTCCACTGTCAACACCAAGCCCAAGGTTGAGATTGAGGGTGGTGATATGAGGTCCTTCTTTACACTGATCATGACTGACCCTGATGTTCCTGGCCCTAGTGACCCTTATCTGAGAGAGCACTTGCACTGGATAGTGACAGATATTCCAGGCACAACAGATGCCACATTTGGGAAAGAGTTGGTGAGCTATGAGGTCCCAAAGCCTAATATTGGAATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGTAGACAGTGTGTTACTCCACCCACTTCAAGGGACCACTTCAACACACGCAAATTCGCAGCAGAGAACGACCTTGGCCTCCCTGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACGGCTGCAAGAAGACGCTAG
Predicted protein sequences of Glyma.19g194300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.19g194300.1.p sequence-type=predicted peptide transcript=Glyma.19g194300.1 locus=Glyma.19g194300 ID=Glyma.19g194300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKMPLEPLIVGRVIGEVLDSFTTSTKMTVSYNKKQVYNGHELFPSTVNTKPKVEIEGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEVPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDHFNTRKFAAENDLGLPVAAVYFNAQRETAARRR*