SoyBase Follow us on Twitter @SoyBaseDatabase
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.14g087500

Feature Type:gene_model
Chromosome:Gm14
Start:7836333
stop:7839345
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g087500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G67360.1AT Subtilase family protein JGI N/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0043086GO-bp negative regulation of catalytic activity JGI N/AIEA
GO:0004252GO-mf serine-type endopeptidase activity EnsemblGenomesN/AIEA
GO:0004252GO-mf serine-type endopeptidase activity JGI N/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0042802GO-mf identical protein binding JGI N/AIEA
PTHR10795Panther PROPROTEIN CONVERTASE SUBTILISIN/KEXIN JGI N/AIEA
PTHR10795:SF17Panther JGI N/AIEA
PF00082PFAM Subtilase family JGI N/AIEA
PF02225PFAM PA domain JGI N/AIEA
PF05922PFAM Peptidase inhibitor I9 JGI N/AIEA

Expression Patterns of Glyma.14g087500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g087500
ParalogEvidenceComments
Glyma.17g236800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g087500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g09670 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g087500
>Glyma.14g087500.1 sequence-type=CDS polypeptide=Glyma.14g087500.1.p locus=Glyma.14g087500 ID=Glyma.14g087500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAAGCCACCGATTTTCGAACCTCTTCAAATTTTCCTTCTCCTACTAATCTTCTATGGCAGCAACACAAAAGCAGAGAAGCAAACAACCCACGACCATGCAAACAAAAAGACCTACATAATCCACATGGACAAGTCCACTATGCCCTTAACCTTCACCGACCACCTTAGCTGGTTCGACTCCTCCCTCAAATCAGCGTCCCCCTCCGCAGAGATTCTATACACCTACAAACACGTGGCCCACGGCTTCTCCACTAGGCTTACTCCAGAGGACGCAGACACACTTTCTAAACAACCCGGAATCCTCTCCGTCATCCCTGAACTCAAATACAAACTCCACACCACAAGAACCCCCTCCTTCCTCGGACTCGACAAAGCCACAACCTTGTTACCCGCCTCGGAGCAGCAGAGCCAGGTCATCATCGGAGTCCTCGACACCGGCGTCTGGCCCGAGCTCAAAAGCCTTGACGACACGGGCCTCGGCCCGGTCCCTTCCACCTGGAAAGGCCAGTGCGAAATTGGCAACAACATGAACTCATCGAACTGCAACAGAAAACTCGTCGGAGCGAGGTTTTTCTCGAAAGGCTACGAAGCCGCACTTGGACCCATCGACACAACCACGGAGTCAAAGTCAGCGCGTGACGACGACGGGCACGGGAGTCACACGTTAACCACCGCGGCGGGCTCGGTCGTACCCGAGGCTAGCCTCTTCGGCTTGGCATCGGGCACGGCACGTGGAATGGCCACGCAAGCGCGCGTGGCGGTTTACAAAGTGTGCTGGCTAGGCGGATGTTTTACCTCCGACATAGCCGCGGGAATCGACAAGGCCATAGAAGACGGCGTGAATGTTTTGTCCATGTCCATTGGGGGAAGCTTGATGGAGTATTATAGAGATATCATCGCGATTGGTTCCTTCACCGCCACGTCACACGGGATTCTGGTGTCCACATCAGCAGGAAACGGTGGGCCCAGCCAAGGAAGTTTGTCCAACGTGGCACCGTGGATAACTACAGTGGGAGCGGGAACTATCGACCGTGATTTTCCAGCATACATAACCCTCGGAACAGGGAAAACATACACCGGAGCTTCTCTTTACAGAGGTAAACCCTTGTCGGATTCGCCGCTTCCTCTTGTTTACGCTGGGAATGCGAGTAACTCTTCTGTAGGGTATCTTTGCTTGCAAGATTCTCTGATTCCTGAAAAGGTATCTGGGAAAATTGTTATATGCGAAAGAGGTGGGAATCCGAGAGTGGAGAAGGGTTTGGTGGTTAAGCTCGCAGGGGGTGCTGGAATGATTTTGGCTAACAGTGAAGCCTACGGAGAAGAATTAGTTGCTGACTCTCATCTTCTCCCTGCTGCGTCTCTGGGACAAAAATCAAGCGAGATTTTGAAGAACTACGTTTCGTCATCTCCTAATCCAACGGCTAAGATTGCTTTCTTAGGGACTCATTTGCAGGTTCAACCTTCTCCAGTTGTAGCGGCTTTTAGCTCCAGAGGACCTAATGCTCTTACCCCAAAGATTCTCAAACCGGATTTAATAGCGCCAGGTGTCAACATTTTAGCTGGCTGGACCGGCGCGGTTGGACCAACCGGTTTAACCGTTGACAGCCGCCACATCAGCTTTAACATAATTTCTGGAACATCCATGTCATGCCCTCACGTGAGTGGCTTAGCCGCGATTCTCAAAGGCGCGCACCCTCAGTGGAGCCCTGCCGCCATTAGGTCTGCCCTCATGACAACAGCATACACAAGTTACAAAAATGGTGAAACGATTCAAGATGTTTCAACAGGACAACCTGCGACACCGTTTGATTACGGAGCAGGACACGTGGACCCTGTGGCCGCTCTTGATCCTGGTCTTGTATATGATGCCAACGTGGACGATTACTTAGGGTTTTTCTGCGCTTTAAACTACTCGTCGTTTCAGATCAAACTTGCTGCGAGGAGGGACTTTACGTGTGACTCGAAGAAGGTTTACAGAGTGGAGGATTTTAATTATCCTTCTTTTGCGGTTCCTTTGGAGACAACTTCGGGGATTGGGGGAGGTTCGGATGCTCCGAAGACAGTGAAGTACTCTAGGGTTTTAACTAACGTGGGAGCTCCGGGAACGTATAAAGCTTCGGTGGTGTCGTTAGGGGATTTGAATGTGAAAATTGTGGTGGAACCGGAGACGCTGAGTTTCACCGAGTTGTACGAGAAGAAGGGTTATATGGTGTCGTTTAGGTACACTTCGATGCCGTCTGGGACGACCAGCTTCGCACGTTTGGAATGGACAGATGGAAAGCATAGGGTTGGAAGTCCAATTGCGTTCAGCTGGACATGA
Predicted protein sequences of Glyma.14g087500
>Glyma.14g087500.1.p sequence-type=predicted peptide transcript=Glyma.14g087500.1 locus=Glyma.14g087500 ID=Glyma.14g087500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKKPPIFEPLQIFLLLLIFYGSNTKAEKQTTHDHANKKTYIIHMDKSTMPLTFTDHLSWFDSSLKSASPSAEILYTYKHVAHGFSTRLTPEDADTLSKQPGILSVIPELKYKLHTTRTPSFLGLDKATTLLPASEQQSQVIIGVLDTGVWPELKSLDDTGLGPVPSTWKGQCEIGNNMNSSNCNRKLVGARFFSKGYEAALGPIDTTTESKSARDDDGHGSHTLTTAAGSVVPEASLFGLASGTARGMATQARVAVYKVCWLGGCFTSDIAAGIDKAIEDGVNVLSMSIGGSLMEYYRDIIAIGSFTATSHGILVSTSAGNGGPSQGSLSNVAPWITTVGAGTIDRDFPAYITLGTGKTYTGASLYRGKPLSDSPLPLVYAGNASNSSVGYLCLQDSLIPEKVSGKIVICERGGNPRVEKGLVVKLAGGAGMILANSEAYGEELVADSHLLPAASLGQKSSEILKNYVSSSPNPTAKIAFLGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGAVGPTGLTVDSRHISFNIISGTSMSCPHVSGLAAILKGAHPQWSPAAIRSALMTTAYTSYKNGETIQDVSTGQPATPFDYGAGHVDPVAALDPGLVYDANVDDYLGFFCALNYSSFQIKLAARRDFTCDSKKVYRVEDFNYPSFAVPLETTSGIGGGSDAPKTVKYSRVLTNVGAPGTYKASVVSLGDLNVKIVVEPETLSFTELYEKKGYMVSFRYTSMPSGTTSFARLEWTDGKHRVGSPIAFSWT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo