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Report for Sequence Feature Glyma.13g276600

Feature Type:gene_model
Chromosome:Gm13
Start:37807568
stop:37811453
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G15350.1AT Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0008375GO-mf acetylglucosaminyltransferase activity EnsemblGenomesN/AIEA
GO:0008375GO-mf acetylglucosaminyltransferase activity JGI N/AIEA
KOG0799 KOG Branching enzyme JGI N/AIEA
PTHR19297Panther GLYCOSYLTRANSFERASE 14 FAMILY MEMBER JGI N/AIEA
PTHR19297:SF2Panther JGI N/AIEA
PF02485PFAM Core-2/I-Branching enzyme JGI N/AIEA
GN7V-67471SoyCyc9-rxn UDP-glucuronosyltransferase 2B7 Plant Metabolic Network ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE


View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.



View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


ParalogEvidenceComments
Glyma.12g224700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Corresponding NameAnnotation VersionEvidenceComments
Glyma13g35180 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.13g276600.2 sequence-type=transcript locus=Glyma.13g276600 ID=Glyma.13g276600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTAGGATTTGAAGCACTGACACAAACAAACGTACACGTTACAAGTTACAAGTCACACATTAAAAAGAAACTCATTGTTCTCTTCTCTTATTCATTATCATTATTATGCGCTTCATTTTAGAGCCTCTCTCTCTCTTATGTGTTTCTTAGACGTGGACGCGTCCTCCATCACAAACTGGTTTGTCCCTCGTTTTTATCTCTGTAGTAAAATTCATTAGTGTGATCTGCATAATCCTGATTAACACTAAACATTTTTTATTTGAGTTATTAAGCTTATCTTTCAGCTCGTGTTGTGTTGTTCTTTGTCATGCAGATGCAGACACTATTCAGAGACAGAGATTGTTGAGAAGATATATGAAGAGGATGCCAAATATGTGTGTTGTAGTGGCTGTTTGATGGTGAATTGGCAATTTATTTTTGAGTCATTGATGGAATCATAGAATGTGAAGTATTACTATCCGTGATAGTTCTCAGTTATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCAATATGCATGCTCTTACTAGTTTCATCCTTCAACATGGGTCTTGTCTCTAAAATTCACTCCATCAATTCACTCTTTTTCTTTCTCCCTTCTCATTTACGCTCAAACCAAACTGCCCCGGTTATTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGCGCTTCCTCGTTTTGCCTACTTGATTTCCGGCTCCAAAGGGGATTTGGAAAAGCTATGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAATCACCGCTAGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTATTCGCTGAGGTTGGGAACGTTTATGTAATCACAAAGGCTAACATGGTGACTTACCGAGGACCAACGATGGTTTCTAATACTCTTCATGCTTGCGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATCTACTATATACTTTTTCAGATTTAGATAGAGGCCTTAATTTCATTGAGCACACAAGTCAGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCGTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTTAATCCTAAGAGACCTCTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACAGTTTTATCACACGACTTTGTTGAATATCTTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTTCAGACTGTTGCATGCAATGCACCAGAATGGGCTAAAACCCTTGTAAATAGTGACTTGCATTATATTTCCTGGGACGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAATGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAGTTTAAGCAAGATGATCCATCCTTGGATTGGATTGATAAAAAGATTCTCCGTAAGAGAAATGGACTATTCCCGCTCGGTGGTTGGTGCACCGGCAAACCCAAATGTTCTGAGATTGGGAACATTTATAAACTCAAACCGGGTCCGGGGTCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAGATCCTGTTGAGGACTTTTGTGGTTGGAGATGGAAGAGTTGGATAGATGAAGGTTATTCTTATAACCAGATACATTAGTATTCCAGCACCTACTTGAAGAGAGACAAGTTTTTGAGGTTAGAGTGCAATTGCACCTCATTCATAATATAGCAAATCAATCCCAGATATTTATTAACTTAGCTATACTTATAGTTAGTTGCCTCTATGTGAAGTACCAAAGCTTGCATGAGAGTCATCTTTCTTTTTGTAGGTCCTTTTTACCCATAGGTAACACAATTTTTAAGCAGCATCATGATCCCGGAATTTTATACATTTTTGCTTATGTTTTTTGTTACTTCACGTTTCATGAGTCACGATCTTTTTGATAGACATCAGAGTTTGGATAATTAAATATTTAAATGCTAGGCTCAATCAGCCAAAAACTCTGCTAGACATTTATTTTCATGTTTCAGTGGATTATGCATGTCTGGATTTATATAAATTGGTTAGTTTTCTCTAGTTCAGTAGCAATTATATTATGACTTGTTTCATCAATTTGGAAAACATTTGTGGCAGAA

>Glyma.13g276600.3 sequence-type=transcript locus=Glyma.13g276600 ID=Glyma.13g276600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTAGGATTTGAAGCACTGACACAAACAAACGTACACGTTACAAGTTACAAGTCACACATTAAAAAGAAACTCATTGTTCTCTTCTCTTATTCATTATCATTATTATGCGCTTCATTTTAGAGCCTCTCTCTCTCTTATGTGTTTCTTAGACGTGGACGCGTCCTCCATCACAAACTGACACTATTCAGAGACAGAGATTGTTGAGAAGATATATGAAGAGGATGCCAAATATGTGTGTTGTAGTGGCTGTTTGATGGTGAATTGGCAATTTATTTTTGAGTCATTGATGGAATCATAGAATGTGAAGTATTACTATCCGTGATAGTTCTCAGTTATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCAATATGCATGCTCTTACTAGTTTCATCCTTCAACATGGGTCTTGTCTCTAAAATTCACTCCATCAATTCACTCTTTTTCTTTCTCCCTTCTCATTTACGCTCAAACCAAACTGCCCCGGTTATTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGCGCTTCCTCGTTTTGCCTACTTGATTTCCGGCTCCAAAGGGGATTTGGAAAAGCTATGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAATCACCGCTAGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTATTCGCTGAGGTTGGGAACGTTTATGTAATCACAAAGGCTAACATGGTGACTTACCGAGGACCAACGATGGTTTCTAATACTCTTCATGCTTGCGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATCTACTATATACTTTTTCAGATTTAGATAGAGGCCTTAATTTCATTGAGCACACAAGTCAGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCGTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTTAATCCTAAGAGACCTCTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACAGTTTTATCACACGACTTTGTTGAATATCTTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTTCAGACTGTTGCATGCAATGCACCAGAATGGGCTAAAACCCTTGTAAATAGTGACTTGCATTATATTTCCTGGGACGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAATGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAGTTTAAGCAAGATGATCCATCCTTGGATTGGATTGATAAAAAGATTCTCCGTAAGAGAAATGGACTATTCCCGCTCGGTGGTTGGTGCACCGGCAAACCCAAATGTTCTGAGATTGGGAACATTTATAAACTCAAACCGGGTCCGGGGTCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAGATCCTGTTGAGGACTTTTGTGGTTGGAGATGGAAGAGTTGGATAGATGAAGGTTATTCTTATAACCAGATACATTAGTATTCCAGCACCTACTTGAAGAGAGACAAGTTTTTGAGGTTAGAGTGCAATTGCACCTCATTCATAATATAGCAAATCAATCCCAGATATTTATTAACTTAGCTATACTTATAGTTAGTTGCCTCTATGTGAAGTACCAAAGCTTGCATGAGAGTCATCTTTCTTTTTGTAGGTCCTTTTTACCCATAGGTAACACAATTTTTAAGCAGCATCATGATCCCGGAATTTTATACATTTTTGCTTATGTTTTTTGTTACTTCACGTTTCATGAGTCACGATCTTTTTGATAGACATCAGAGTTTGGATAATTAAATATTTAAATGCTAGGCTCAATCAGCCAAAAACTCTGCTAGACATTTATTTTCATGTTTCAGTGGATTATGCATGTCTGGATTTATATAAATTGGTTAGTTTTCTCTAGTTCAGTAGCAATTATATTATGACTTGTTTCATCAATTTGGAAAACATTTGTGGCAGAA

>Glyma.13g276600.1 sequence-type=CDS polypeptide=Glyma.13g276600.1.p locus=Glyma.13g276600 ID=Glyma.13g276600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCAATATGCATGCTCTTACTAGTTTCATCCTTCAACATGGGTCTTGTCTCTAAAATTCACTCCATCAATTCACTCTTTTTCTTTCTCCCTTCTCATTTACGCTCAAACCAAACTGCCCCGGTTATTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGCGCTTCCTCGTTTTGCCTACTTGATTTCCGGCTCCAAAGGGGATTTGGAAAAGCTATGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAATCACCGCTAGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTATTCGCTGAGGTTGGGAACGTTTATGTAATCACAAAGGCTAACATGGTGACTTACCGAGGACCAACGATGGTTTCTAATACTCTTCATGCTTGCGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATCTACTATATACTTTTTCAGATTTAGATAGAGGCCTTAATTTCATTGAGCACACAAGTCAGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCGTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTTAATCCTAAGAGACCTCTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACAGTTTTATCACACGACTTTGTTGAATATCTTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTTCAGACTGTTGCATGCAATGCACCAGAATGGGCTAAAACCCTTGTAAATAGTGACTTGCATTATATTTCCTGGGACGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAATGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAGTTTAAGCAAGATGATCCATCCTTGGATTGGATTGATAAAAAGATTCTCCGTAAGAGAAATGGACTATTCCCGCTCGGTGGTTGGTGCACCGGCAAACCCAAATGTTCTGAGATTGGGAACATTTATAAACTCAAACCGGGTCCGGGGTCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAG

>Glyma.13g276600.2 sequence-type=CDS polypeptide=Glyma.13g276600.2.p locus=Glyma.13g276600 ID=Glyma.13g276600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCAATATGCATGCTCTTACTAGTTTCATCCTTCAACATGGGTCTTGTCTCTAAAATTCACTCCATCAATTCACTCTTTTTCTTTCTCCCTTCTCATTTACGCTCAAACCAAACTGCCCCGGTTATTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGCGCTTCCTCGTTTTGCCTACTTGATTTCCGGCTCCAAAGGGGATTTGGAAAAGCTATGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAATCACCGCTAGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTATTCGCTGAGGTTGGGAACGTTTATGTAATCACAAAGGCTAACATGGTGACTTACCGAGGACCAACGATGGTTTCTAATACTCTTCATGCTTGCGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATCTACTATATACTTTTTCAGATTTAGATAGAGGCCTTAATTTCATTGAGCACACAAGTCAGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCGTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTTAATCCTAAGAGACCTCTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACAGTTTTATCACACGACTTTGTTGAATATCTTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTTCAGACTGTTGCATGCAATGCACCAGAATGGGCTAAAACCCTTGTAAATAGTGACTTGCATTATATTTCCTGGGACGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAATGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAGTTTAAGCAAGATGATCCATCCTTGGATTGGATTGATAAAAAGATTCTCCGTAAGAGAAATGGACTATTCCCGCTCGGTGGTTGGTGCACCGGCAAACCCAAATGTTCTGAGATTGGGAACATTTATAAACTCAAACCGGGTCCGGGGTCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAG

>Glyma.13g276600.3 sequence-type=CDS polypeptide=Glyma.13g276600.3.p locus=Glyma.13g276600 ID=Glyma.13g276600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCAATATGCATGCTCTTACTAGTTTCATCCTTCAACATGGGTCTTGTCTCTAAAATTCACTCCATCAATTCACTCTTTTTCTTTCTCCCTTCTCATTTACGCTCAAACCAAACTGCCCCGGTTATTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGCGCTTCCTCGTTTTGCCTACTTGATTTCCGGCTCCAAAGGGGATTTGGAAAAGCTATGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAATCACCGCTAGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTATTCGCTGAGGTTGGGAACGTTTATGTAATCACAAAGGCTAACATGGTGACTTACCGAGGACCAACGATGGTTTCTAATACTCTTCATGCTTGCGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATCTACTATATACTTTTTCAGATTTAGATAGAGGCCTTAATTTCATTGAGCACACAAGTCAGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCGTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTTAATCCTAAGAGACCTCTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACAGTTTTATCACACGACTTTGTTGAATATCTTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTTCAGACTGTTGCATGCAATGCACCAGAATGGGCTAAAACCCTTGTAAATAGTGACTTGCATTATATTTCCTGGGACGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAATGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAGTTTAAGCAAGATGATCCATCCTTGGATTGGATTGATAAAAAGATTCTCCGTAAGAGAAATGGACTATTCCCGCTCGGTGGTTGGTGCACCGGCAAACCCAAATGTTCTGAGATTGGGAACATTTATAAACTCAAACCGGGTCCGGGGTCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAG

>Glyma.13g276600.1.p sequence-type=predicted peptide transcript=Glyma.13g276600.1 locus=Glyma.13g276600 ID=Glyma.13g276600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGFLNVEKKWLYPFIVCFAICMLLLVSSFNMGLVSKIHSINSLFFFLPSHLRSNQTAPVIVERKASPAPAPARPALPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHMDLESPLEERMEIAHRIERQHVFAEVGNVYVITKANMVTYRGPTMVSNTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYTFSDLDRGLNFIEHTSQLGWKFDKRAMPLIVDPGLYMSTKSDVFWVNPKRPLPTAFKLFTGSAWTVLSHDFVEYLVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNAPEWAKTLVNSDLHYISWDVPPKQHPHVLNINDTDKMVESGAAFARKFKQDDPSLDWIDKKILRKRNGLFPLGGWCTGKPKCSEIGNIYKLKPGPGSQRLHRLVAGLTLKAKSGEDQCK*

>Glyma.13g276600.2.p sequence-type=predicted peptide transcript=Glyma.13g276600.2 locus=Glyma.13g276600 ID=Glyma.13g276600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGFLNVEKKWLYPFIVCFAICMLLLVSSFNMGLVSKIHSINSLFFFLPSHLRSNQTAPVIVERKASPAPAPARPALPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHMDLESPLEERMEIAHRIERQHVFAEVGNVYVITKANMVTYRGPTMVSNTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYTFSDLDRGLNFIEHTSQLGWKFDKRAMPLIVDPGLYMSTKSDVFWVNPKRPLPTAFKLFTGSAWTVLSHDFVEYLVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNAPEWAKTLVNSDLHYISWDVPPKQHPHVLNINDTDKMVESGAAFARKFKQDDPSLDWIDKKILRKRNGLFPLGGWCTGKPKCSEIGNIYKLKPGPGSQRLHRLVAGLTLKAKSGEDQCK*

>Glyma.13g276600.3.p sequence-type=predicted peptide transcript=Glyma.13g276600.3 locus=Glyma.13g276600 ID=Glyma.13g276600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGFLNVEKKWLYPFIVCFAICMLLLVSSFNMGLVSKIHSINSLFFFLPSHLRSNQTAPVIVERKASPAPAPARPALPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHMDLESPLEERMEIAHRIERQHVFAEVGNVYVITKANMVTYRGPTMVSNTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYTFSDLDRGLNFIEHTSQLGWKFDKRAMPLIVDPGLYMSTKSDVFWVNPKRPLPTAFKLFTGSAWTVLSHDFVEYLVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNAPEWAKTLVNSDLHYISWDVPPKQHPHVLNINDTDKMVESGAAFARKFKQDDPSLDWIDKKILRKRNGLFPLGGWCTGKPKCSEIGNIYKLKPGPGSQRLHRLVAGLTLKAKSGEDQCK*







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