|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G08110.4 | AT | lactoylglutathione lyase family protein / glyoxalase I family protein | JGI | N/A | IEA |
GO:0004462 | GO-mf | lactoylglutathione lyase activity | EnsemblGenomes | N/A | IEA |
GO:0016829 | GO-mf | lyase activity | EnsemblGenomes | N/A | IEA |
GO:0046872 | GO-mf | metal ion binding | EnsemblGenomes | N/A | IEA |
KOG2944 | KOG | Glyoxalase | JGI | N/A | IEA |
PTHR10374 | Panther | LACTOYLGLUTATHIONE LYASE (GLYOXALASE I) | JGI | N/A | IEA |
PF00903 | PFAM | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | JGI | N/A | IEA |
PWY-5386 | SoyCyc9 | methylglyoxal degradation I | Plant Metabolic Network | ISS | |
GN7V-55869 | SoyCyc9-rxn | lactoylglutathione lyase | Plant Metabolic Network | ISS |
Locus | Gene Symbol | Protein Name |
---|---|---|
GLYI-15 | Glyoxylase 1 gene 15 | |
GLXI | lactoylglutathione lyase |
Glyma.11g194300 not represented in the dataset |
Glyma.11g194300 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.12g079700 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
>Glyma.11g194300.1 sequence-type=CDS polypeptide=Glyma.11g194300.1.p locus=Glyma.11g194300 ID=Glyma.11g194300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGACAGTCACCGCTTCCTTACACCGTCTTTCTCGTCTCCGATTCATCGCCAAACCCCAACCTTTCCTATCTCCTCATTCAATCCCCTCCCATTTCTCTCTCACCCCCAAAACCAAGAAAGCGAATCGATTCCGATTCCTCTCAATGGCTGCGGAACCCAAGGAATCGCCTTCCAACAACCCCGGTCTCCATACAACTCCTGACGAAGCCACCAAGGGTTACATCATGCAACAAACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTCGATTTTTATTCTCGAGTCTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCGGAGATGAAGTTCAGCCTGTACTTCATGGGCTATGAGAATACGGCAGAAGCTCCAAGTAATCCAATTGATAAAGTGGTTTGGACCTTTTCTCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGCGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGAACCTCGTGGCTTTGGACACATTGGTGTAACTGTTGATGACACATACAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGAAGATGGGAAAATGAAAGGTATAGCATTTATTAAAGATCCTGATGGATACTGGATTGAAATCTTTGATCGGAAAACAATAGGAAATGTAACACAAACTGCTGCTTAG
>Glyma.11g194300.1.p sequence-type=predicted peptide transcript=Glyma.11g194300.1 locus=Glyma.11g194300 ID=Glyma.11g194300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MTVTASLHRLSRLRFIAKPQPFLSPHSIPSHFSLTPKTKKANRFRFLSMAAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTQTAA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||