Report for Sequence Feature Glyma.08g189200
Feature Type: gene_model
Chromosome: Gm08
Start: 15172904
stop: 15178499
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.08g189200
Proteins Associated with Glyma.08g189200
Locus Gene Symbol Protein Name
LOX seed linoleate 9S-lipoxygenase-3
Expression Patterns of Glyma.08g189200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Gene model name correspondences to Glyma.08g189200 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma08g20190 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.08g189200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.08g189200.2 sequence-type=transcript locus=Glyma.08g189200 ID=Glyma.08g189200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAACATTTGGCTCATTAAATAATTCTTAGTTTTTGTCTATAAGTACCTTGCATCACTGTGTTCTTTTCCTGACATCTCACAAGCCAAACAAGGATGTACCATCGTTTTTTTCCATAAGAAAATATCGTTGGTATAGCTTAAAGAAGTAGCTAAGAATGTATTCAGGGGTGAAAGGGTTGTTCAACAGAAGCCAGAAGGTGAAGGGAACGGTGGTGTTGATGCGTAAGAATGTGCTTGACATCAACAGCATAACGAGTGTGAGAGGGCTTATTGGCACCGGCATCAACATAATTGGCTCAACAATTGATGGTCTTACTTCCTTCTTGGGTCGTTCTGTGTGTCTTCAGTTGATTAGTGCTACCAAGGCTGATGGAAATGGAAATGGGGTAGTTGGAAAGAAGACCTATTTGGAAGGTATTATTACGTCGATACCAACATTGGGAGCAGGCCAATCTGCGTTCACTATTCATTTTGAATGGGACGCAGACATGGGAATTCCTGGAGCATTTTTAATAAAAAATTATATGCAAGTTGAGCTCTTCCTAGTGAGTTTGACTCTTGAAGACATTCCTAATCAAGGAAGCATGCACTTTGTTTGCAACTCATGGGTTTACAATTCTAAAGTTTACGAAAAGGATCGGATTTTCTTTGCCAGTGAGACATATGTTCCAAGTGAAACACCAGGTCCATTAGTGACATATAGAGAAGCAGAATTGCAGGCTCTAAGAGGAAATGGAACAGGGAAGCGCAAGGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGCAATCCTGACAGTGGTGAAAACTTTGCTCGTCCAGTTCTTGGAGGATCTCTCACTCATCCCTACCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAAGAAAGATCCCAACAGTGAGAAACCTGGCGAGGCTTATATACCAAGAGATGAAAATTTCGGTCACTTGAAATCATCTGATTTCCTTACTTATGGGCTAAAATCTTTAACTCGAAGCTTCTTGCCTGCACTCAAAACTGTTTTTGATATAAATTTCACACCGAACGAGTTTGATAGCTTCGAAGAAGTGCGTGCACTCTGTGAAGGTGGAATTAAACTGCCTACAGATATACTTAGCAAAATTAGCCCCTTACCTGTGCTCAAGGAAATCTTCCGCACTGATGGTGAAAGTGTCCTAAAGTTTTCAGTACCTGATTTAATTAAAGTTAGTAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGTGTAAACCCTTGTGTGATTCGTCGTCTACAAGAGTTCCCACCACAAAGCAAGCTTGATCCCTCAGTCTATGGTGATCAAACAAGTAAAATGACTATAGATCACTTGGAGATTAACCTTGAAGGGCTCACAGTAGATAAGGCGATTAAGGATCAGAGATTATTCATATTAGATCACCATGACACATTTATGCCATTTTTGAGAAGGATAGATGAATCTAAATCATCAAAGGCTTATGCCACTAGAACAATCCTTTTCTTGAAAGATGATGGGACCTTAAAGCCATTGGCCATCGAATTAAGTTTGCCACATCCAGGTCAACAACAGCTTGGTGCCTATAGTAAAGTCATCTTGCCTGCAAACCAAGGTGTAGAAAGTACAATTTGGCTGTTGGCAAAGGCTCATGTTATTGTGAATGACTCGTGTTATCATCAACTCATAAGCCACTGGTTGAATACTCATGCCGTGATTGAGCCATTTGTCATAGCAACAAACAGGAATCTCAagaaaacctttttgggtggaaagtatgctgtggagatatcttcgtcaggttacaaaaattgggttttcctcgaccaagcattacctgctgatctcatcaagagAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTAGAAATATGGGATGCTATTAAGACATGGGTACAAGAGTATGTCTCCTTGTACTATGCAACAAATGATGCAATTAAAAAAGACCATGAACTCCAAGCATGGTGGAAAGAAGTTGTTGAGAAGGGACATGGTGACTTGAAAGACAAGCCTTGGTGGCCTAAAATGCAGACTCTTCAAGAGCTTATTCAATCATGTTCTACTATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTTAATTTTGGACAATACCCTTATGGTGGTTTTATCCTAAACCGTCCAACTCTTAGCAGGAGATGGATTCCAGAAGAAGGAACTCCAGAATATGACGAGATGACAAAGAATCCTCAAAAGGCTTATTTGAGAACAATCACGCCAAAGTTTCAGGCTCTTGTTGATCTTTCAGTGATAGAGATATTGTCAAGACATGCTTCTGATGAGGTCTACCTTGGACAGAGGGACAATCCAAATTGGACCTCTAATCCAAAGGCAATAGAAGCCTTTAAAAAGTTTGGAAAAAAGCTAGCAGAGATTGAGACAAAAATCTCAGAAAGAAACCATGATCCAAATCTTAGAAATCGAACCGGGCCGGCTCAATTGCCCTACACTGTGCTTCTTCCTACCAGTGAAACAGGGTTGACTTTTAGAGGAATTCCCAACAGCATCTCTATCTAAATGAGTGTGGCTCAATCGTATTGTACTTTTACTTTTGAATATCTCATATACGTACGTAAGCTTATGTTTATTTTAGGGTGATGTTTAGTAATTGTGTTTGTTTGAGTAATATTGTATTTAGGGTAAGATTTAGTAATATGGGTGATGTTCAGAATGCTAATTAATAAATAAGCTCTTTAGCAAACTACTAGCTTGTTATTGCAGTTGACAGGGAATTGTTTCTTCTCCCTTCAGCTGTTTTAAGTTCTATTCTATATTTGAGCATTGTAATATTTGCACTGTGTTATTGGTGTCAAGATTCGACCAATCAATTCGATTAATATTA
Coding sequences of Glyma.08g189200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.08g189200.1 sequence-type=CDS polypeptide=Glyma.08g189200.1.p locus=Glyma.08g189200 ID=Glyma.08g189200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATTCAGGGGTGAAAGGGTTGTTCAACAGAAGCCAGAAGGTGAAGGGAACGGTGGTGTTGATGCGTAAGAATGTGCTTGACATCAACAGCATAACGAGTGTGAGAGGGCTTATTGGCACCGGCATCAACATAATTGGCTCAACAATTGATGGTCTTACTTCCTTCTTGGGTCGTTCTGTGTGTCTTCAGTTGATTAGTGCTACCAAGGCTGATGGAAATGGAAATGGGGTAGTTGGAAAGAAGACCTATTTGGAAGGTATTATTACGTCGATACCAACATTGGGAGCAGGCCAATCTGCGTTCACTATTCATTTTGAATGGGACGCAGACATGGGAATTCCTGGAGCATTTTTAATAAAAAATTATATGCAAGTTGAGCTCTTCCTAGTGAGTTTGACTCTTGAAGACATTCCTAATCAAGGAAGCATGCACTTTGTTTGCAACTCATGGGTTTACAATTCTAAAGTTTACGAAAAGGATCGGATTTTCTTTGCCAGTGAGACATATGTTCCAAGTGAAACACCAGGTCCATTAGTGACATATAGAGAAGCAGAATTGCAGGCTCTAAGAGGAAATGGAACAGGGAAGCGCAAGGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGCAATCCTGACAGTGGTGAAAACTTTGCTCGTCCAGTTCTTGGAGGATCTCTCACTCATCCCTACCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAAGAAAGATCCCAACAGTGAGAAACCTGGCGAGGCTTATATACCAAGAGATGAAAATTTCGGTCACTTGAAATCATCTGATTTCCTTACTTATGGGCTAAAATCTTTAACTCGAAGCTTCTTGCCTGCACTCAAAACTGTTTTTGATATAAATTTCACACCGAACGAGTTTGATAGCTTCGAAGAAGTGCGTGCACTCTGTGAAGGTGGAATTAAACTGCCTACAGATATACTTAGCAAAATTAGCCCCTTACCTGTGCTCAAGGAAATCTTCCGCACTGATGGTGAAAGTGTCCTAAAGTTTTCAGTACCTGATTTAATTAAAGTTAGTAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGTGTAAACCCTTGTGTGATTCGTCGTCTACAAGAGTTCCCACCACAAAGCAAGCTTGATCCCTCAGTCTATGGTGATCAAACAAGTAAAATGACTATAGATCACTTGGAGATTAACCTTGAAGGGCTCACAGTAGATAAGGCGATTAAGGATCAGAGATTATTCATATTAGATCACCATGACACATTTATGCCATTTTTGAGAAGGATAGATGAATCTAAATCATCAAAGGCTTATGCCACTAGAACAATCCTTTTCTTGAAAGATGATGGGACCTTAAAGCCATTGGCCATCGAATTAAGTTTGCCACATCCAGGTCAACAACAGCTTGGTGCCTATAGTAAAGTCATCTTGCCTGCAAACCAAGGTGTAGAAAGTACAATTTGGCTGTTGGCAAAGGCTCATGTTATTGTGAATGACTCGTGTTATCATCAACTCATAAGCCACTGGTTGAATACTCATGCCGTGATTGAGCCATTTGTCATAGCAACAAACAGGAATCTCAGTATTCTTCACCCTATTTATAAACTTCTATTTCCTCACTATCGTGACACAATGAATATCAATGCACTTGCTCGACAATCACTTATTAATGCTGATGGCTTTATAGAGAAAACCTTTTTGGGTGGAAAGTATGCTGTGGAGATATCTTCGTCAGGTTACAAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTAGAAATATGGGATGCTATTAAGACATGGGTACAAGAGTATGTCTCCTTGTACTATGCAACAAATGATGCAATTAAAAAAGACCATGAACTCCAAGCATGGTGGAAAGAAGTTGTTGAGAAGGGACATGGTGACTTGAAAGACAAGCCTTGGTGGCCTAAAATGCAGACTCTTCAAGAGCTTATTCAATCATGTTCTACTATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTTAATTTTGGACAATACCCTTATGGTGGTTTTATCCTAAACCGTCCAACTCTTAGCAGGAGATGGATTCCAGAAGAAGGAACTCCAGAATATGACGAGATGACAAAGAATCCTCAAAAGGCTTATTTGAGAACAATCACGCCAAAGTTTCAGGCTCTTGTTGATCTTTCAGTGATAGAGATATTGTCAAGACATGCTTCTGATGAGGTCTACCTTGGACAGAGGGACAATCCAAATTGGACCTCTAATCCAAAGGCAATAGAAGCCTTTAAAAAGTTTGGAAAAAAGCTAGCAGAGATTGAGACAAAAATCTCAGAAAGAAACCATGATCCAAATCTTAGAAATCGAACCGGGCCGGCTCAATTGCCCTACACTGTGCTTCTTCCTACCAGTGAAACAGGGTTGACTTTTAGAGGAATTCCCAACAGCATCTCTATCTAA
>Glyma.08g189200.2 sequence-type=CDS polypeptide=Glyma.08g189200.2.p locus=Glyma.08g189200 ID=Glyma.08g189200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATTCAGGGGTGAAAGGGTTGTTCAACAGAAGCCAGAAGGTGAAGGGAACGGTGGTGTTGATGCGTAAGAATGTGCTTGACATCAACAGCATAACGAGTGTGAGAGGGCTTATTGGCACCGGCATCAACATAATTGGCTCAACAATTGATGGTCTTACTTCCTTCTTGGGTCGTTCTGTGTGTCTTCAGTTGATTAGTGCTACCAAGGCTGATGGAAATGGAAATGGGGTAGTTGGAAAGAAGACCTATTTGGAAGGTATTATTACGTCGATACCAACATTGGGAGCAGGCCAATCTGCGTTCACTATTCATTTTGAATGGGACGCAGACATGGGAATTCCTGGAGCATTTTTAATAAAAAATTATATGCAAGTTGAGCTCTTCCTAGTGAGTTTGACTCTTGAAGACATTCCTAATCAAGGAAGCATGCACTTTGTTTGCAACTCATGGGTTTACAATTCTAAAGTTTACGAAAAGGATCGGATTTTCTTTGCCAGTGAGACATATGTTCCAAGTGAAACACCAGGTCCATTAGTGACATATAGAGAAGCAGAATTGCAGGCTCTAAGAGGAAATGGAACAGGGAAGCGCAAGGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGCAATCCTGACAGTGGTGAAAACTTTGCTCGTCCAGTTCTTGGAGGATCTCTCACTCATCCCTACCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAAGAAAGATCCCAACAGTGAGAAACCTGGCGAGGCTTATATACCAAGAGATGAAAATTTCGGTCACTTGAAATCATCTGATTTCCTTACTTATGGGCTAAAATCTTTAACTCGAAGCTTCTTGCCTGCACTCAAAACTGTTTTTGATATAAATTTCACACCGAACGAGTTTGATAGCTTCGAAGAAGTGCGTGCACTCTGTGAAGGTGGAATTAAACTGCCTACAGATATACTTAGCAAAATTAGCCCCTTACCTGTGCTCAAGGAAATCTTCCGCACTGATGGTGAAAGTGTCCTAAAGTTTTCAGTACCTGATTTAATTAAAGTTAGTAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGTGTAAACCCTTGTGTGATTCGTCGTCTACAAGAGTTCCCACCACAAAGCAAGCTTGATCCCTCAGTCTATGGTGATCAAACAAGTAAAATGACTATAGATCACTTGGAGATTAACCTTGAAGGGCTCACAGTAGATAAGGCGATTAAGGATCAGAGATTATTCATATTAGATCACCATGACACATTTATGCCATTTTTGAGAAGGATAGATGAATCTAAATCATCAAAGGCTTATGCCACTAGAACAATCCTTTTCTTGAAAGATGATGGGACCTTAAAGCCATTGGCCATCGAATTAAGTTTGCCACATCCAGGTCAACAACAGCTTGGTGCCTATAGTAAAGTCATCTTGCCTGCAAACCAAGGTGTAGAAAGTACAATTTGGCTGTTGGCAAAGGCTCATGTTATTGTGAATGACTCGTGTTATCATCAACTCATAAGCCACTGGTTGAATACTCATGCCGTGATTGAGCCATTTGTCATAGCAACAAACAGGAATCTCAAGAAAACCTTTTTGGGTGGAAAGTATGCTGTGGAGATATCTTCGTCAGGTTACAAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTAGAAATATGGGATGCTATTAAGACATGGGTACAAGAGTATGTCTCCTTGTACTATGCAACAAATGATGCAATTAAAAAAGACCATGAACTCCAAGCATGGTGGAAAGAAGTTGTTGAGAAGGGACATGGTGACTTGAAAGACAAGCCTTGGTGGCCTAAAATGCAGACTCTTCAAGAGCTTATTCAATCATGTTCTACTATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTTAATTTTGGACAATACCCTTATGGTGGTTTTATCCTAAACCGTCCAACTCTTAGCAGGAGATGGATTCCAGAAGAAGGAACTCCAGAATATGACGAGATGACAAAGAATCCTCAAAAGGCTTATTTGAGAACAATCACGCCAAAGTTTCAGGCTCTTGTTGATCTTTCAGTGATAGAGATATTGTCAAGACATGCTTCTGATGAGGTCTACCTTGGACAGAGGGACAATCCAAATTGGACCTCTAATCCAAAGGCAATAGAAGCCTTTAAAAAGTTTGGAAAAAAGCTAGCAGAGATTGAGACAAAAATCTCAGAAAGAAACCATGATCCAAATCTTAGAAATCGAACCGGGCCGGCTCAATTGCCCTACACTGTGCTTCTTCCTACCAGTGAAACAGGGTTGACTTTTAGAGGAATTCCCAACAGCATCTCTATCTAA
Predicted protein sequences of Glyma.08g189200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.08g189200.1.p sequence-type=predicted peptide transcript=Glyma.08g189200.1 locus=Glyma.08g189200 ID=Glyma.08g189200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYSGVKGLFNRSQKVKGTVVLMRKNVLDINSITSVRGLIGTGINIIGSTIDGLTSFLGRSVCLQLISATKADGNGNGVVGKKTYLEGIITSIPTLGAGQSAFTIHFEWDADMGIPGAFLIKNYMQVELFLVSLTLEDIPNQGSMHFVCNSWVYNSKVYEKDRIFFASETYVPSETPGPLVTYREAELQALRGNGTGKRKEWDRVYDYDVYNDLGNPDSGENFARPVLGGSLTHPYPRRGRTGRKPTKKDPNSEKPGEAYIPRDENFGHLKSSDFLTYGLKSLTRSFLPALKTVFDINFTPNEFDSFEEVRALCEGGIKLPTDILSKISPLPVLKEIFRTDGESVLKFSVPDLIKVSKSAWMTDEEFAREMIAGVNPCVIRRLQEFPPQSKLDPSVYGDQTSKMTIDHLEINLEGLTVDKAIKDQRLFILDHHDTFMPFLRRIDESKSSKAYATRTILFLKDDGTLKPLAIELSLPHPGQQQLGAYSKVILPANQGVESTIWLLAKAHVIVNDSCYHQLISHWLNTHAVIEPFVIATNRNLSILHPIYKLLFPHYRDTMNINALARQSLINADGFIEKTFLGGKYAVEISSSGYKNWVFLDQALPADLIKRGMAIEDSSCPNGLRLVIEDYPYAVDGLEIWDAIKTWVQEYVSLYYATNDAIKKDHELQAWWKEVVEKGHGDLKDKPWWPKMQTLQELIQSCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRWIPEEGTPEYDEMTKNPQKAYLRTITPKFQALVDLSVIEILSRHASDEVYLGQRDNPNWTSNPKAIEAFKKFGKKLAEIETKISERNHDPNLRNRTGPAQLPYTVLLPTSETGLTFRGIPNSISI*
>Glyma.08g189200.2.p sequence-type=predicted peptide transcript=Glyma.08g189200.2 locus=Glyma.08g189200 ID=Glyma.08g189200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYSGVKGLFNRSQKVKGTVVLMRKNVLDINSITSVRGLIGTGINIIGSTIDGLTSFLGRSVCLQLISATKADGNGNGVVGKKTYLEGIITSIPTLGAGQSAFTIHFEWDADMGIPGAFLIKNYMQVELFLVSLTLEDIPNQGSMHFVCNSWVYNSKVYEKDRIFFASETYVPSETPGPLVTYREAELQALRGNGTGKRKEWDRVYDYDVYNDLGNPDSGENFARPVLGGSLTHPYPRRGRTGRKPTKKDPNSEKPGEAYIPRDENFGHLKSSDFLTYGLKSLTRSFLPALKTVFDINFTPNEFDSFEEVRALCEGGIKLPTDILSKISPLPVLKEIFRTDGESVLKFSVPDLIKVSKSAWMTDEEFAREMIAGVNPCVIRRLQEFPPQSKLDPSVYGDQTSKMTIDHLEINLEGLTVDKAIKDQRLFILDHHDTFMPFLRRIDESKSSKAYATRTILFLKDDGTLKPLAIELSLPHPGQQQLGAYSKVILPANQGVESTIWLLAKAHVIVNDSCYHQLISHWLNTHAVIEPFVIATNRNLKKTFLGGKYAVEISSSGYKNWVFLDQALPADLIKRGMAIEDSSCPNGLRLVIEDYPYAVDGLEIWDAIKTWVQEYVSLYYATNDAIKKDHELQAWWKEVVEKGHGDLKDKPWWPKMQTLQELIQSCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRWIPEEGTPEYDEMTKNPQKAYLRTITPKFQALVDLSVIEILSRHASDEVYLGQRDNPNWTSNPKAIEAFKKFGKKLAEIETKISERNHDPNLRNRTGPAQLPYTVLLPTSETGLTFRGIPNSISI*