Report for Sequence Feature Glyma.05g123900
Feature Type: gene_model
Chromosome: Gm05
Start: 31761509
stop: 31762737
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.05g123900
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G06860.1 AT
polygalacturonase inhibiting protein 1
JGI N/A IEA
PTHR24420 Panther
LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE
JGI N/A IEA
PF08263 PFAM
Leucine rich repeat N-terminal domain
JGI N/A IEA
Proteins Associated with Glyma.05g123900
Locus Gene Symbol Protein Name
PGIP2 polygalacturonase inhibitor 2 gene
Expression Patterns of Glyma.05g123900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Gene model name correspondences to Glyma.05g123900 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma05g25360 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.05g123900
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g123900.1 sequence-type=CDS polypeptide=Glyma.05g123900.1.p locus=Glyma.05g123900 ID=Glyma.05g123900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCACACTTAAGCATTCTCTTTCTCTTGCTCGTAGCCCTATCCTTCACTCCCGCACTGTCAGAACTATGCAACCCACTAGATAAACAAGCCCTCCTTCAAATCAAGAGAGAGCTTGGCAACCCAACCAATCTCTCCTCATGGAACCCAAAGACAGACTGCTGCAACAACAACTGGGTAGGTGTCTCATGCGACACCGTCACCCCAACATACCGCGTCGACAACCTCGACCTCTCCGAAATTTACCTCACCAAACCCTACCCTATTCCCCCCTCCATAGGCAACCTTCCCTACCTCAAATTTCTTTTCATCACCAACTCCCCCAACATCGTTGGCACAATACCCACCACCATCACCAAACTCACCAAGCTTCGTGAACTCTATATCAGATACACTAGTGTCTCCGGCCAGATACCCCATTTCTTGTCCCAAATGAAAACCCTCCAATTCCTCGAATTCTCCAACTGCAAACTCTCCGGCAACCTCCCTACCTGGCTTCCTTCTCTCCCTGACCTCTACGGAGTCGCCTTCGACAACAATCGCATCTCCGGCGCCATCCCGGACTCGTTTGGCTTCGTCTCGAAGCGGTTCGGGTACATGACACTCTCCGGAAACCGCCTCTCCGGGAAGATTCCGTCGTCGCTGGGGAAGCTGGACCTGAAGACTGTGGATTTGTCTCGTAACAAGCTTGAGGGTGATGCGTCTGTGTTGTTTGGGTCGGAGAAACGCACGGAGATGATATATCTGGCACACAACTTGTTTGCTTTTGATTTTGGAAAAGTAAGGGTGCCAAAGGTCTTGGACTCGTTGGATGTTGGGCACAATCGTTTATATGGGACACTACCTAAGGGACTTACGTCGCTTAAGAATCTGTACCGGTTCGATGTGAGCTACAATAAACTTTGTGGTGAGATTCCACGGGGTGGTAAGTTGCAAGAAATTGATGAGTCTTTCTATGCTAATAACAAGTGCTTGTGTGGCTCTCCTCTTCCAAGCTGCAAACGATTCTAG
Predicted protein sequences of Glyma.05g123900
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.05g123900.1.p sequence-type=predicted peptide transcript=Glyma.05g123900.1 locus=Glyma.05g123900 ID=Glyma.05g123900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSHLSILFLLLVALSFTPALSELCNPLDKQALLQIKRELGNPTNLSSWNPKTDCCNNNWVGVSCDTVTPTYRVDNLDLSEIYLTKPYPIPPSIGNLPYLKFLFITNSPNIVGTIPTTITKLTKLRELYIRYTSVSGQIPHFLSQMKTLQFLEFSNCKLSGNLPTWLPSLPDLYGVAFDNNRISGAIPDSFGFVSKRFGYMTLSGNRLSGKIPSSLGKLDLKTVDLSRNKLEGDASVLFGSEKRTEMIYLAHNLFAFDFGKVRVPKVLDSLDVGHNRLYGTLPKGLTSLKNLYRFDVSYNKLCGEIPRGGKLQEIDESFYANNKCLCGSPLPSCKRF*