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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G18250 | AT | Annotation by Michelle Graham. TAIR10: 4-phosphopantetheine adenylyltransferase | chr2:7940025-7941499 FORWARD LENGTH=176 | SoyBase | E_val: 6.00E-84 | ISS |
GO:0006629 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid metabolic process | SoyBase | N/A | ISS |
GO:0006970 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to osmotic stress | SoyBase | N/A | ISS |
GO:0009058 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biosynthetic process | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0015937 | GO-bp | Annotation by Michelle Graham. GO Biological Process: coenzyme A biosynthetic process | SoyBase | N/A | ISS |
GO:0019344 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cysteine biosynthetic process | SoyBase | N/A | ISS |
GO:0019915 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid storage | SoyBase | N/A | ISS |
GO:0040007 | GO-bp | Annotation by Michelle Graham. GO Biological Process: growth | SoyBase | N/A | ISS |
GO:0080020 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of coenzyme A biosynthetic process | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0004140 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: dephospho-CoA kinase activity | SoyBase | N/A | ISS |
GO:0004595 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: pantetheine-phosphate adenylyltransferase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0016779 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotidyltransferase activity | SoyBase | N/A | ISS |
PTHR24702 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PF01467 | PFAM | Cytidylyltransferase | JGI | ISS | |
UniRef100_G7KEY2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Phosphopantetheine adenylyltransferase n=1 Tax=Medicago truncatula RepID=G7KEY2_MEDTR | SoyBase | E_val: 2.00E-104 | ISS |
UniRef100_I1J8T5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1J8T5_SOYBN | SoyBase | E_val: 9.00E-128 | ISS |
Glyma01g37870 not represented in the dataset |
Glyma01g37870 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma01g37870.2 sequence type=transcript gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high AGATAATGCCAAAGCTTGAAACTTGTGTGCAGGCTTCAGCGGAGTTGGCAAGGCGCCGGATTGTAATTGGAGTTTGCGATGGACCTATGCTGGCAAAAAAACAGTTTGCTGAACTGATACAGCCCATTGAGGAAAGGATAAATAATGTCAAAACTTTCATAAAGTCTATCAAGCCGGAGTTGGAAGTGCAAGCTGTGCCAATCACAGATCCATTTGGCCCTTCCATTACAGATGAGAACTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGAGGATTGGCTATAAACAGAAGAAGAGCTGAAAGAGATCTTTCACAGTTGAAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGAAATTAAGCTGAGTTCATCAATGCTACGGAAGATTGAGGCTGAAAGGGCTAAACAACAAAACACGATACCGCAGACTTAGTTACAGACAATTTGTTTAACTTTTTTCTTTCAAAATATTTCTTCAAAGATGAGTTTAAGGTGTCCATTAAAGCAACTGACATGTGAGTGCATGTTACCATGTTATGACATTGTTTAAGTTTAAAAGGTGGAAGTCACATTCTTTAGGAAAAATATTGTAAAGATGTATCGTTTTTTTTTCAACGCACCAAACAAAAAACATTATTAGTTTGTTTAGAGGAATGTGTTGTATTTATATTTATATTTTCTCTAATAGAAATAAGTATTTTATTCTAAACA >Glyma01g37870.3 sequence type=transcript gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CTAACGAACCATTGGTTCAATATATATAACAACGAATCCGATCCTCTTTTCATCTCACACCTACTGCCACCAGTGAAAGTCATTCCTGCACATCGAATGGCGGTTCACGGTGACGATGACACCATGGTGATGGTGGTTCCCAAACTCTCTCCGCCCAACACCTACGAAGCCGTCGTCAATGGTGGCACCTTCGACCGATTGCACGACGGCCACCGCCTCTTCCTCACCGCTTCAGCGGAGTTGGCAAGGCGCCGGATTGTAATTGGAGTTTGCGATGGACCTATGCTGGCAAAAAAACAGTTTGCTGAACTGATACAGCCCATTGAGGAAAGGATAAATAATGTCAAAACTTTCATAAAGTCTATCAAGCCGGAGTTGGAAGTGCAAGCTGTGCCAATCACAGATCCATTTGGCCCTTCCATTACAGATGAGAACTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGAGGATTGGCTATAAACAGAAGAAGAGCTGAAAGAGATCTTTCACAGTTGAAGGTCTCAATTTATTGTTTGTGTAGTTTGGTTATAATTTCTGACATAAAAGTTAAGAAAATATTATCAAAATATTTTGTCAGATATTAGAAATTATTTTCTTGGATCTTATGCAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGAAATTAAGCTGAGTTCATCAATGCTACGGAAGATTGAGGCTGAAAGGGCTAAACAACAAAACACGATACCGCAGACTTAGTTACAGACAATTTGTTTAACTTTTTTCTTTCAAAATATTTCTTCAAAGATGAGTTTAAGGTGTCCATTAAAGCAACTGACATGTGAGTGCATGTTACCATGTTATGACATTGTTTAAGTTTAAAAGGTGGAAGTCACATTCTTTAGGAAAAATATTGTAAAGATGTATCGTTTTTTTTTCAACGCACCAAACAAAAAACATTATTAGTTTGTTTAGAGGAATGTGTTGTATTTATATTTATATTTTCTCTAATAGAAATAAGTATTTTATTCTAAACA
>Glyma01g37870.1 sequence type=CDS gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCGGTTCACGGTGACGATGACACCATGGTGATGGTGGTTCCCAAACTCTCTCCGCCCAACACCTACGAAGCCGTCGTCAATGGTGGCACCTTCGACCGATTGCACGACGGCCACCGCCTCTTCCTCACCGCTTCAGCGGAGTTGGCAAGGCGCCGGATTGTAATTGGAGTTTGCGATGGACCTATGCTGGCAAAAAAACAGTTTGCTGAACTGATACAGCCCATTGAGGAAAGGATAAATAATGTCAAAACTTTCATAAAGTCTATCAAGCCGGAGTTGGAAGTGCAAGCTGTGCCAATCACAGATCCATTTGGCCCTTCCATTACAGATGAGAACTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGAGGATTGGCTATAAACAGAAGAAGAGCTGAAAGAGATCTTTCACAGTTGAAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGAAATTAAGCTGAGTTCATCAATGCTACGGAAGATTGAGGCTGAAAGGGCTAAACAACAAAACACGATACCGCAGACTTAG >Glyma01g37870.2 sequence type=CDS gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCCAAAGCTTGAAACTTGTGTGCAGGCTTCAGCGGAGTTGGCAAGGCGCCGGATTGTAATTGGAGTTTGCGATGGACCTATGCTGGCAAAAAAACAGTTTGCTGAACTGATACAGCCCATTGAGGAAAGGATAAATAATGTCAAAACTTTCATAAAGTCTATCAAGCCGGAGTTGGAAGTGCAAGCTGTGCCAATCACAGATCCATTTGGCCCTTCCATTACAGATGAGAACTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGAGGATTGGCTATAAACAGAAGAAGAGCTGAAAGAGATCTTTCACAGTTGAAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGAAATTAAGCTGAGTTCATCAATGCTACGGAAGATTGAGGCTGAAAGGGCTAAACAACAAAACACGATACCGCAGACTTAG >Glyma01g37870.3 sequence type=CDS gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCGGTTCACGGTGACGATGACACCATGGTGATGGTGGTTCCCAAACTCTCTCCGCCCAACACCTACGAAGCCGTCGTCAATGGTGGCACCTTCGACCGATTGCACGACGGCCACCGCCTCTTCCTCACCGCTTCAGCGGAGTTGGCAAGGCGCCGGATTGTAATTGGAGTTTGCGATGGACCTATGCTGGCAAAAAAACAGTTTGCTGAACTGATACAGCCCATTGAGGAAAGGATAAATAATGTCAAAACTTTCATAAAGTCTATCAAGCCGGAGTTGGAAGTGCAAGCTGTGCCAATCACAGATCCATTTGGCCCTTCCATTACAGATGAGAACTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGAGGATTGGCTATAAACAGAAGAAGAGCTGAAAGAGATCTTTCACAGTTGAAGGTCTCAATTTATTGTTTGTGTAGTTTGGTTATAATTTCTGACATAAAAGTTAAGAAAATATTATCAAAATATTTTGTCAGATATTAG
>Glyma01g37870.1 sequence type=predicted peptide gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAVHGDDDTMVMVVPKLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAELARRRIVIGVCDGPMLAKKQFAELIQPIEERINNVKTFIKSIKPELEVQAVPITDPFGPSITDENLEAVIVSKETLPGGLAINRRRAERDLSQLKIEVVDLVSGESGEIKLSSSMLRKIEAERAKQQNTIPQT* >Glyma01g37870.2 sequence type=predicted peptide gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MPKLETCVQASAELARRRIVIGVCDGPMLAKKQFAELIQPIEERINNVKTFIKSIKPELEVQAVPITDPFGPSITDENLEAVIVSKETLPGGLAINRRRAERDLSQLKIEVVDLVSGESGEIKLSSSMLRKIEAERAKQQNTIPQT* >Glyma01g37870.3 sequence type=predicted peptide gene model=Glyma01g37870 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAVHGDDDTMVMVVPKLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAELARRRIVIGVCDGPMLAKKQFAELIQPIEERINNVKTFIKSIKPELEVQAVPITDPFGPSITDENLEAVIVSKETLPGGLAINRRRAERDLSQLKVSIYCLCSLVIISDIKVKKILSKYFVRY*
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