GO term enrichment analysis tool
Search for the GRIN descriptor data
Phenotypic reports for the Northern Uniform Soybean Trials (NUST) from 1989 to present
Browser interface to all of the files in SoyBase.
Overviews of data characteristics at SoyBase: genome assembly sizes, gene counts, BUSCO coverage, etc.
GlycineMine: an InterMine interface for most of the data at SoyBase, including genetic data. Tools include a powerful query engine.
USDA Germplasm collection SoySNP50K Haplotypes: downloads, viewing on browsers, etc.
Legacy SoyBase tool: Gene expression resources for soybean
Search for Allele
Find corresponding gene IDs between accessions
Search for genes
Search for trait associations
Functionally annotate protein or nucleotide sequences and place them into gene trees
Run BLASTs against LIS genomes, CDSes, and proteins
View genetic and comparative maps.
Visualization and analysis of diversity of genetic variants.
Gene expression resources for soybean.
A multiple chromosome visualisation tool for visualizing resequencing or SNP array data
Gene symbol viewer
Genome browsers for soybean and related species. (Also accessible from the GENOMICS tab)
Browser for dynamically discovering and viewing genomic synteny across selected species.
View GIS location information for soybean accessions.
SoyBase Soybean growth, development and structural ontology.
Soybean parentage and pedigrees
Interactive visualization of multiple GWAS and QTL data sets, using synteny to identify potentially conserved association regions between species.