List of gene models for which there was as significant change in gene expression in one of the underground tissues (root and nodule) over all other tissues in this study.

,young_leaf,flower,cm_pod,shellm2,shellm1,seedm2,seedm1,seed0,seed1,seed2,seed3,seed4,root,nodule
Glyma0023s00410,1,1,1,0,1,0,0,0,0,0,0,0,19,2
Glyma0023s00610,1,2,1,2,1,1,1,0,3,2,2,1,11,9
Glyma0024s00230,10,5,9,12,7,2,6,11,7,4,7,4,7,105
Glyma0024s00240,0,0,0,0,0,0,0,0,0,0,0,0,0,7
Glyma0028s00210,10,11,7,7,4,2,3,6,3,2,3,2,18,5
Glyma0041s00240,0,2,0,1,0,0,0,0,0,0,0,0,11,4
Glyma0041s00250,0,2,0,2,0,0,0,0,0,0,0,0,19,7
Glyma0041s00260,6,7,6,9,10,1,4,8,6,2,4,1,9,15
Glyma0041s00290,1,2,1,2,1,0,0,1,1,1,1,1,8,2
Glyma0041s00310,1,1,1,1,0,0,0,0,0,0,0,0,5,1
Glyma0041s00350,0,5,0,0,2,0,0,0,0,0,0,0,3,18
Glyma0041s00360,0,1,0,0,0,0,0,0,0,0,1,0,3,0
Glyma0048s00280,0,3,1,1,2,2,3,3,3,1,3,3,30,153
Glyma0169s00210,41,50,40,44,46,13,23,24,12,11,15,8,105,26
Glyma01g00450,0,0,0,0,0,0,0,0,0,0,0,0,16,0
Glyma01g00530,0,0,0,0,0,0,0,0,0,0,0,0,5,0
Glyma01g00560,27,13,24,17,18,6,21,28,15,5,8,5,13,53
Glyma01g00720,1,2,1,1,2,0,1,0,1,1,2,1,5,3
Glyma01g00790,0,0,0,0,0,0,0,0,0,0,0,0,2,1
Glyma01g00870,1,2,1,3,5,1,0,1,2,1,1,1,5,9
Glyma01g01000,3,6,4,3,1,1,3,2,7,7,7,3,11,10
Glyma01g01010,1,1,1,1,0,1,1,1,1,1,1,0,9,3
Glyma01g01070,0,0,1,0,0,0,0,0,1,0,0,0,13,1
Glyma01g01110,9,10,9,9,15,5,11,7,12,4,7,6,16,38
Glyma01g01160,0,0,0,0,0,0,0,0,0,0,0,0,1,0
Glyma01g01180,14,82,60,88,71,7,17,18,7,3,4,2,106,25
Glyma01g01210,0,3,1,1,0,1,1,0,1,0,0,0,1,38
Glyma01g01300,1,2,2,1,1,5,2,1,1,0,1,0,5,29
Glyma01g01310,59,41,83,59,47,29,40,55,32,15,15,4,40,115
Glyma01g01360,2,1,1,1,2,1,2,2,1,1,1,0,5,9
Glyma01g01440,5,4,3,4,4,2,2,1,3,3,6,7,13,8
Glyma01g01610,9,12,11,10,6,6,8,10,9,5,13,9,28,21
Glyma01g01690,0,0,0,0,0,0,0,0,0,0,0,0,6,0
Glyma01g01700,0,0,0,0,0,0,0,1,0,0,0,0,10,0
Glyma01g02120,10,14,9,8,5,1,3,4,4,3,5,4,28,4
Glyma01g02180,4,47,7,16,11,1,2,2,1,0,0,0,78,18
Glyma01g02200,43,37,29,31,37,7,21,14,7,5,9,6,40,176
Glyma01g02230,342,353,585,614,843,19,57,108,96,50,155,40,1048,4
Glyma01g02280,6,10,8,9,7,3,8,7,6,4,8,5,14,12
Glyma01g02290,1,1,2,3,2,1,7,7,6,3,3,3,45,12
Glyma01g02330,2,4,4,3,1,1,1,1,1,1,2,2,18,1
Glyma01g02360,1,12,3,4,3,3,3,4,0,0,0,1,23,0
Glyma01g02400,11,26,18,16,14,4,10,15,10,6,11,17,134,137
Glyma01g02440,0,0,0,0,0,0,0,0,0,0,0,0,0,1
Glyma01g02450,0,0,0,1,0,0,0,0,0,0,0,0,32,14
Glyma01g02460,0,0,0,0,0,0,1,0,0,0,0,0,29,17
Glyma01g02470,15,10,18,18,22,6,9,6,7,5,8,6,80,34
Glyma01g02640,5,6,6,4,5,2,2,3,3,1,4,4,8,9
Glyma01g02750,1,6,1,0,1,0,1,0,0,1,1,0,10,10
Glyma01g02790,6,5,7,7,7,3,5,4,3,2,3,1,7,20
Glyma01g02820,8,20,6,9,6,4,3,1,1,1,1,0,30,3
Glyma01g02880,2,0,0,0,0,0,0,0,0,0,0,0,21,6
Glyma01g03070,139,144,129,108,260,11,22,41,69,35,88,47,1104,968
Glyma01g03190,1,1,4,4,4,0,0,0,1,0,1,1,29,7
Glyma01g03420,1,0,0,0,1,0,0,0,0,0,0,0,3,0
Glyma01g03460,0,0,0,0,0,0,0,0,0,0,0,0,0,5
Glyma01g03470,0,3,2,1,4,0,0,0,0,0,0,0,2,332
Glyma01g03600,2,4,2,3,2,2,2,1,2,1,4,1,9,2
Glyma01g03650,6,6,5,5,5,2,5,3,5,3,6,2,16,3
Glyma01g03750,27,26,26,25,22,13,22,19,15,10,14,8,36,29
Glyma01g03850,1,2,1,1,0,0,1,1,2,1,2,2,12,29
Glyma01g04120,1,0,0,0,0,0,0,0,0,0,0,0,4,1
Glyma01g04170,12,9,9,10,13,8,8,12,11,7,12,7,17,49
Glyma01g04290,0,0,0,0,0,1,1,0,0,0,0,0,181,10
Glyma01g04310,0,0,0,0,0,0,0,0,0,0,0,0,11,0
Glyma01g04340,0,3,0,1,1,0,0,0,0,0,0,1,13,0
Glyma01g04370,0,0,0,0,0,0,0,0,0,0,0,0,0,5
Glyma01g04380,1,0,1,0,2,0,0,0,0,0,0,0,19,38
Glyma01g04400,8,10,11,7,8,5,7,9,7,4,6,5,24,10
Glyma01g04450,0,1,0,0,1,0,0,0,0,0,0,0,6,0
Glyma01g04510,7,4,3,6,7,1,2,2,2,1,2,2,6,24
Glyma01g04670,1,2,0,1,3,0,1,1,1,0,1,0,8,0
Glyma01g04760,3,8,0,2,1,0,0,0,0,0,0,0,24,1
Glyma01g04810,0,0,0,0,0,0,0,0,0,0,0,0,5,5
Glyma01g05060,0,0,0,0,0,0,1,1,3,2,9,7,0,18
Glyma01g05440,2,4,3,4,4,1,3,2,3,1,1,0,5,13
Glyma01g05470,9,4,6,6,6,2,5,6,5,2,5,3,6,23
Glyma01g05550,6,15,6,6,4,5,3,2,2,1,1,1,11,40
Glyma01g05820,0,3,2,2,2,1,0,0,0,0,2,2,6,1
Glyma01g05850,1,4,0,1,0,0,0,0,0,0,0,0,38,0
Glyma01g05860,3,2,3,2,3,2,2,3,2,1,3,1,6,11
Glyma01g05880,1,5,4,6,5,1,2,2,3,2,5,4,12,1
Glyma01g05890,1,0,0,1,1,0,0,0,0,0,0,0,4,0
Glyma01g06270,11,9,7,7,5,5,10,4,8,3,7,5,16,14
Glyma01g06290,4,3,3,2,2,1,1,1,1,0,2,1,7,4
Glyma01g06550,1,3,1,1,0,0,0,0,0,0,1,0,15,1
Glyma01g06600,4,5,2,5,3,4,2,1,2,0,2,1,13,21
Glyma01g06640,14,19,19,17,13,5,8,16,12,6,16,7,34,18
Glyma01g06770,0,0,0,0,0,0,0,0,0,0,0,0,14,1
Glyma01g06780,0,0,0,0,0,0,0,0,0,0,0,0,6,0
Glyma01g06870,1,2,3,3,5,0,1,0,0,0,0,0,1,22
Glyma01g06880,0,1,1,1,1,3,3,3,2,1,1,1,0,9
Glyma01g07010,4,9,3,6,5,6,8,7,6,5,8,7,11,14
Glyma01g07090,7,6,8,6,6,2,6,4,6,3,5,5,9,17
Glyma01g07390,0,2,0,1,0,1,3,3,4,2,4,3,9,7
Glyma01g07580,0,0,0,0,0,0,6,13,6,2,5,2,13,48
Glyma01g07690,2,7,4,4,3,4,7,8,9,5,8,4,22,10
Glyma01g07910,0,0,0,0,0,0,0,0,0,0,0,0,2,0
Glyma01g07930,20,15,21,29,37,18,32,25,22,8,11,5,81,25
Glyma01g08540,3,4,1,2,1,1,1,1,1,0,0,0,4,7
Glyma01g09120,9,24,10,16,14,6,10,13,15,7,12,7,16,29
Glyma01g09640,5,4,10,5,7,2,8,7,10,5,9,7,10,19
Glyma01g09650,0,0,1,0,0,0,0,0,0,0,0,0,8,0
Glyma01g09900,0,2,5,2,10,10,15,17,16,9,23,19,19,49
Glyma01g10070,98,201,90,244,162,49,60,137,108,80,176,73,271,507
Glyma01g10080,57,118,76,140,64,26,49,54,60,41,61,38,109,244
Glyma01g10370,10,9,10,8,6,2,2,2,5,2,6,3,19,9
Glyma01g10850,4,3,4,3,4,0,2,2,2,1,2,2,7,16
Glyma01g10860,5,4,6,3,5,0,1,4,6,1,3,3,12,27
Glyma01g14170,0,0,0,0,0,0,0,0,0,0,0,0,13,0
Glyma01g14700,9,7,11,9,6,3,5,8,14,8,8,11,20,33
Glyma01g16140,0,0,0,1,0,0,0,0,0,0,0,0,3,26
Glyma01g16360,1,0,1,1,0,0,0,0,0,0,0,0,4,0
Glyma01g17330,0,0,0,0,0,0,0,0,0,0,0,0,0,486
Glyma01g17590,0,0,0,0,0,0,0,0,0,0,0,0,35,0
Glyma01g18520,0,0,0,0,0,0,0,0,0,0,0,0,2,0
Glyma01g18750,0,0,0,0,0,1,1,0,1,0,0,0,1,7
Glyma01g19420,7,33,9,16,19,5,7,7,13,13,17,6,66,56
Glyma01g20760,23,25,19,23,17,4,10,10,10,6,13,7,39,13
Glyma01g20900,0,2,0,0,0,0,0,0,0,0,0,0,76,1
Glyma01g20920,10,9,15,6,5,1,5,9,8,2,5,5,13,32
Glyma01g20980,0,0,0,0,0,0,0,0,0,0,0,0,37,0
Glyma01g21010,0,0,0,0,0,0,0,0,0,0,0,0,0,8
Glyma01g21020,0,0,0,0,0,0,0,0,0,0,0,0,0,22
Glyma01g21510,0,0,1,1,2,1,2,1,0,0,0,1,5,26
Glyma01g21520,0,1,1,1,2,2,1,1,1,0,0,1,6,24
Glyma01g21620,0,3,2,2,2,0,0,0,0,0,0,0,7,5
Glyma01g21680,3,2,3,4,3,2,3,2,3,1,2,1,5,11
Glyma01g21900,3,5,2,3,1,1,1,1,1,0,1,0,7,12
Glyma01g22160,1,6,4,5,2,2,1,3,5,1,3,2,17,31
Glyma01g22610,0,0,0,0,0,0,0,0,0,0,0,0,0,2
Glyma01g22630,4,3,3,3,2,1,2,3,3,1,2,1,4,7
Glyma01g22670,0,0,0,0,0,0,0,1,0,0,0,0,12,11
Glyma01g22800,0,2,0,0,1,1,1,0,1,0,0,0,7,3
Glyma01g23140,1,2,1,1,1,1,1,2,1,0,1,0,5,1
Glyma01g23180,2,3,4,4,5,1,2,2,2,1,2,1,11,15
Glyma01g23790,0,0,0,0,0,0,0,0,0,0,0,0,2,0
Glyma01g24710,0,5,0,0,1,0,0,0,0,0,0,0,9,17
Glyma01g24820,0,0,0,0,0,0,0,0,0,0,0,0,7,5
Glyma01g24950,17,22,10,19,16,7,18,15,11,6,15,4,78,6
Glyma01g25040,4,6,3,5,4,2,4,3,3,2,7,2,9,5
Glyma01g25270,24,9,11,12,4,1,4,7,5,2,3,2,148,73
Glyma01g26220,6,7,11,8,9,3,3,7,4,1,3,1,18,5
Glyma01g26300,18,41,28,46,41,21,40,32,35,20,35,21,68,85
Glyma01g26750,0,0,0,0,0,0,0,0,0,0,0,0,8,1
Glyma01g26970,13,8,4,5,4,2,2,5,6,3,6,6,3,19
Glyma01g27280,2,1,2,3,2,2,2,1,1,1,1,1,1,10
Glyma01g27440,0,1,0,0,0,0,0,0,0,0,0,0,1,5
Glyma01g27710,1,1,1,1,1,0,0,0,0,0,0,0,8,3
Glyma01g27840,22,14,11,11,10,3,2,1,4,2,2,1,49,6
Glyma01g28310,1,3,1,0,3,1,0,0,1,0,0,0,7,0
Glyma01g28510,0,0,0,0,0,0,0,0,0,0,0,0,2,0
Glyma01g28760,0,3,0,0,1,0,0,0,0,0,0,0,49,6
Glyma01g28850,0,0,1,1,0,0,0,0,0,0,0,0,12,4
Glyma01g28880,0,0,0,0,0,0,0,0,0,0,0,0,11,3
Glyma01g29190,0,0,1,1,0,1,5,6,2,1,1,0,11,0
Glyma01g29410,4,6,3,3,2,0,0,0,1,1,2,2,14,0
Glyma01g29950,18,12,22,24,20,4,14,11,18,9,15,13,45,26
Glyma01g30320,3,5,3,2,1,1,2,2,2,1,2,1,2,6
Glyma01g30400,5,8,6,5,4,3,4,5,3,2,5,2,15,5
Glyma01g31360,27,23,20,26,17,15,18,28,12,6,9,6,44,35
Glyma01g31470,14,8,13,14,13,5,10,5,7,4,7,5,18,41
Glyma01g31480,2,1,1,1,0,0,0,0,0,0,0,0,3,3
Glyma01g31550,0,0,0,0,0,0,0,0,0,0,0,0,15,1
Glyma01g31570,7,6,6,5,7,3,4,5,6,3,10,7,8,15
Glyma01g31660,0,0,0,0,0,0,0,0,0,0,0,0,102,5
Glyma01g31750,0,3,1,1,1,0,0,0,0,0,0,0,642,31
Glyma01g31780,2,3,4,3,3,0,1,2,0,1,1,1,15,3
Glyma01g31900,1,1,0,1,2,2,1,3,2,1,1,1,8,0
Glyma01g31910,0,0,0,0,0,0,0,0,0,0,0,0,0,247
Glyma01g31940,0,0,0,0,1,1,3,3,1,0,2,1,0,14
Glyma01g32070,0,1,0,0,1,0,0,0,0,0,0,0,6,1
Glyma01g32090,0,36,4,10,7,4,6,4,9,2,3,1,93,163
Glyma01g32130,3,1,0,0,0,2,5,0,0,0,0,1,10,11
Glyma01g32270,0,0,0,0,0,0,0,0,0,0,0,0,8,0
Glyma01g32390,0,3,2,2,1,1,0,0,0,0,0,0,0,38
Glyma01g32430,4,5,4,4,4,1,3,4,4,2,3,2,34,4
Glyma01g32450,1,1,0,1,1,0,0,0,0,0,0,0,38,8
Glyma01g32460,0,1,0,0,1,0,0,0,0,0,0,0,15,5
Glyma01g32940,0,0,0,0,0,0,0,0,0,0,0,0,0,23
Glyma01g32990,1,2,0,0,0,0,1,0,0,2,2,0,1,13
Glyma01g33170,0,0,0,0,0,1,0,1,1,0,0,0,55,1
Glyma01g33440,0,8,0,0,0,0,0,0,0,0,0,0,68,1
Glyma01g33450,0,7,0,1,0,0,0,0,0,0,0,0,89,2
Glyma01g33650,5,7,6,7,8,1,1,4,2,1,1,0,13,3
Glyma01g33720,17,11,22,19,26,5,21,14,17,11,19,23,25,38
Glyma01g33730,59,36,79,69,94,13,78,53,60,42,68,85,89,140
Glyma01g33960,0,0,0,0,0,0,0,0,0,0,0,0,10,0
Glyma01g34530,1,1,0,0,0,0,1,0,0,0,0,0,13,0
Glyma01g34580,0,0,0,0,0,0,0,1,0,1,1,0,20,6
Glyma01g34660,11,9,6,9,5,5,7,6,6,3,7,3,15,21
Glyma01g35130,5,11,6,7,7,2,5,3,4,1,5,5,18,27
Glyma01g35250,0,0,0,0,0,0,0,0,0,0,0,0,6,13
Glyma01g35260,0,0,0,0,0,0,0,0,0,0,0,0,9,11
Glyma01g35370,5,5,5,7,3,3,4,3,3,2,3,1,13,7
Glyma01g35380,4,5,1,2,1,1,6,0,5,1,2,2,18,26
Glyma01g35430,0,0,0,0,0,0,0,0,0,0,0,0,3,2
Glyma01g35570,3,8,2,4,1,3,3,0,4,1,2,1,3,27
Glyma01g35660,2,3,0,2,7,1,1,1,4,2,4,4,9,13
Glyma01g35960,0,4,5,2,2,5,5,2,3,1,1,2,4,11
Glyma01g35980,1,2,3,4,5,1,1,2,1,1,1,1,13,10
Glyma01g36070,15,10,15,11,12,4,12,14,6,3,4,4,26,18
Glyma01g36170,2,2,2,2,1,1,1,0,0,0,1,0,10,1
Glyma01g36320,9,10,7,7,8,4,7,8,5,2,5,3,12,16
Glyma01g36360,2,3,2,1,1,2,4,3,2,2,6,3,0,13
Glyma01g36410,25,23,21,23,19,7,17,16,13,7,14,8,42,31
Glyma01g36440,25,19,34,39,36,13,33,33,18,8,12,8,33,275
Glyma01g36590,0,0,0,0,1,0,0,0,0,0,0,0,32,8
Glyma01g36710,3,1,2,2,4,1,1,3,2,0,2,1,7,9
Glyma01g36720,0,2,3,6,11,1,0,0,0,1,1,0,26,11
Glyma01g36740,9,10,9,12,15,4,6,9,5,5,7,5,27,6
Glyma01g36750,9,10,11,11,11,5,9,9,6,3,6,4,27,9
Glyma01g36830,4,2,3,3,4,4,4,3,4,2,4,3,4,7
Glyma01g36870,9,10,9,7,4,4,8,8,6,3,7,3,14,9
Glyma01g36920,2,1,0,0,0,1,3,5,8,3,8,7,1,12
Glyma01g36950,0,0,0,0,0,0,0,0,0,0,0,0,4,1
Glyma01g36960,6,4,3,6,7,2,3,4,4,2,4,2,20,11
Glyma01g37040,0,0,0,0,0,0,0,0,0,1,0,0,27,3
Glyma01g37080,2,1,0,1,1,0,2,2,1,1,0,0,10,2
Glyma01g37200,0,1,0,0,1,0,0,0,0,0,0,0,2,86
Glyma01g37240,0,0,0,0,0,0,0,0,0,0,0,0,1,8
Glyma01g37300,81,131,50,65,49,39,60,62,64,22,58,65,91,371
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Glyma01g37420,2,5,3,4,3,0,1,1,2,1,2,2,13,19
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