SoyBase Follow us on Twitter @SoyBaseDatabase
Integrating Genetics and Genomics to Advance Soybean Research

Seed phytate 1-1
Parent 1:AGS Boggs-RR
Parent 2:CX1834-1-2
Num loci tested:318
Percent Variation Explained:11
Trait name:Seed phytate content

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000281
Plant OntologyPO:0009010

     
Other related QTL's
Seed phytate 1-2

Other names for the QTL
Phytate 1-1

References for the QTL
Walker et al. 2006Genetic Mapping of Loci Associated with Seed Phytic Acid Content in CX1834-1-2 Soybean 
Crop Sci. 2006, 46(1):390-397

     
Maps containing Seed phytate 1-1
MapLGStartEnd
GmComposite2003_L L61.9069.00See this QTL region in Sequence Browser

Loci positively associated with the QTL
Satt561Phenotypic_R2.11
Satt561LOD_score6.4
Satt561P_value<.001
Satt561Favorable_allele_sourceCX1834-1-2

Population types used in identification of the QTL
F2

Parent trait values associated with the QTL
ParentTrait
AGS Boggs-RRNormal phytate production
CX1834-1-2Low phytate production

Loci associated with the QTL
Satt561

Methods used to identify the QTL
Map Manager QTX

Comments about the QTL
AGS Boggs-RR is parent 1, CX1834-1-2 is parent 2
Epistasis between Phytate 1-1 and 1-2 accounts for an additional 8-11% variation in phytate levels"






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo