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Seed coat color 2-1
Parent 1:Toyoharuka
Parent 2:Toyomusume
Num loci tested:105
Interval length:5.53
Trait name:Seed coat color

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000190
Plant OntologyPO:0009088

     
Other related QTL's
Seed coat color 2-2

References for the QTL
Ohnishi et al. 2011Variation of GmIRCHS (Glycine max inverted-repeat CHS pseudogene) is related to tolerance of low temperature-induced seed coat discoloration in yellow soybean 
Theor. Appl. Genet. 2011, 122(3):633-642

     
Maps containing Seed coat color 2-1
MapLGStartEnd
GmComposite2003_A2 A250.9856.52See this QTL region in Sequence Browser

Loci positively associated with the QTL
Sat_215LOD_score16.6
Sat_215Parent_140% pigmentation
Sat_215Parent_20% pigmentation
Sat_215Phenotypic_R241
Sat_215Additive_effect0.91

Population types used in identification of the QTL
F5 RIL

Parent trait values associated with the QTL
ParentTrait
ToyoharukaColor change tolerant
ToyomusumeColor change susceptible

Loci associated with the QTL
Sat_215

Methods used to identify the QTL
Map Manager QTX
QTL Cartographer 2.5
CIM

Comments about the QTL
Parent_1 is Toyoharuka, Parent_2 is Toyomusume






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