QTLName Seed cadmium 2-1

Seed cadmium 2-1

Parent 1:
Parent 2:
Num loci tested:	1536
Interval length:	1.91
Interval LOD score:	3.21
Percent Variation Explained:	5
Trait name:	Seed cadmium concentration

Controlled vocabulary terms associated with the QTL

Source	Accession Number
Plant Trait Ontology	TO:0006059
Plant Ontology	PO:0009010

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References for the QTL

Ramamurthy et al. 2014a

Identification of new QTLs for seed mineral, cysteine, and methionine concentrations in soybean
Mol Breeding. 2017, 34:431-445

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Maps containing Seed cadmium 2-1

Map	LG	Start	End
GmComposite2003_G	G	51.40	53.31	See this QTL region in Sequence Browser

Loci positively associated with the QTL

BARC-059485-15839

Additive_effect

23.08

Population types used in identification of the QTL

F5 RIL

Other QTLs studied

Seed nickel

Seed Cys

Seed Met

Seed Met plus Cys

Seed weight

Loci associated with the QTL

BARC-059485-15839

BARC-055557-13432

Methods used to identify the QTL

MergeMap

QTL Cartographer

Comments about the QTL

The trait measured was seed cadmium content. QTL detected using joint linkage mapping between three populations, Williams 82 x DSR-173, Williams 82 x NKS19-90, and Williams 82 x Vinton 81.

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain