SoyBase Follow us on Twitter @SoyBaseDatabase
Integrating Genetics and Genomics to Advance Soybean Research



SCN 36-8
Parent 1:Magellan
Parent 2:PI438489B
Heritability:0.81
Num loci tested:203
Interval length:20.99
Interval LOD score:8.6
Interval R2:15.5
Percent Variation Explained:15.5
Trait name:Reaction to Heterodera glycines

SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
SCN 36-1
SCN 36-2
SCN 36-3
SCN 36-4
SCN 36-5
SCN 36-6
SCN 36-7

Vuong et al. 2011Confirmation of quantitative trait loci for resistance to multiple-HG types of soybean cyst nematode (Heterodera glycines Ichinohe) 
Euph. 2011, 181(1):101-113

     
MapLGStartEnd
GmComposite2003_C1 C15.3626.35See this QTL region in Sequence Browser

Satt396Parent_1188.90%
Satt396Parent_28.50%
Satt396Favorable_allele_sourcePI438489B
Satt396Additive_effect23.2

F2:3

ParentTrait
MagellanSCN susceptible
PI438489BSCN resistant

Satt690
Satt396
Satt194

CIM

Interval approximated from figure in publication
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. QTL associated with resistance to SCN type 1.3.5.6.7
Publication used Female Index (FI) to quantify nematode resistance. Calculated as a percent: {(# of female cyst nematodes on a plant)/(Avg #of female nematodes on susceptible variety 'Hutcheson')}x100
Parent_1 is Magellan, Parent_2 is PI438489B






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo