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Pod color 1-1
Parent 1:W05
Parent 2:C08
Interval length:2
Percent Variation Explained:30.5
Trait name:Pod color

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0002617
Plant OntologyPO:0009001

     
Other related QTL's
Salt tolerance
Total growth duration
Seed coat color
Seed anthocyanin content
Trailing growth
Pod number
Seeds per plant
Nodule number
Seed antioxidant content
Seed length to width ratio

References for the QTL
Qi et al. 2014bIdentification of a novel salt tolerance gene in wild soybean by whole-genome sequencing 
Nature Communications (2014) 5:4340

     
Maps containing Pod color 1-1
MapLGStartEnd
GmComposite2003_L L43.2045.20See this QTL region in Sequence Browser

Loci positively associated with the QTL
Gm19:37367542Parent_1Salt tolerant
Gm19:37367542Parent_2Salt intolerant

Population types used in identification of the QTL
RIL

Parent trait values associated with the QTL
ParentTrait
W05Salt tolerant
C08Salt intolerant

Loci associated with the QTL
Gm19:37367542

Methods used to identify the QTL
Kosambi
QTLCartographer

Comments about the QTL
Locus was approximately placed on the SoyBase Composite2003 genetic map by comparing the given base pair range in the Wm82.a2 genome, identifying the nearest genetically mapped markers on each side of the given range, and interpolating the markerŐs position on the genetic map to a similar relative position.






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