JBrowse tutorials
SoyBase uses JBrowse to view genetic and genomic data. This post showcases a tutorial for JBrowse.
All Glycine genomes within the datastore have a JBrowse instance and at least has the gene model prediction available for that particular genome. The reference genome Williams 82 have multiple tracks.
List of all the tracks available on Williams 82 genome versions.
Wm82.gnm6
- Genes
- Markers
Wm82.gnm5
- Genes
- Markers
Wm82.gnm4
- Genes
- Markers
- Diversity
- Cell-type Accessible Chromatin Regions(ACRs)
- Cell-type ARCs motifs
- Single cell ATAC-seq
- Single-nucleus RNA-Seq
- Transcription
Wm82.gnm2
- Genes
- Markers
- Diversity
- Synteny
- Gene Expression
- Histone Modification
- Methylation
Wm82.gnm1
- Genes
- Markers
- Diversity